MDP0000690933 (Malus domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MDP0000690933 T229105_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000690933 Homeodomain 83 126

Links

Other Homeodomain family TFs
Other Malus domestica TFs

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NKX6-1 Homo sapiens ENSG00000163623 D 0.645
BARX1 Homo sapiens ENSG00000131668 D 0.602
NKX6-3 Homo sapiens ENSG00000165066 D 0.612
ENSSHAG00000009294 Sarcophilus harrisii ENSSHAG00000009294 I 0.657
ENSSHAG00000011988 Sarcophilus harrisii ENSSHAG00000011988 I 0.606
Eucgr.D00184 Eucalyptus grandis Eucgr.D00184 I 0.610
ANCCEY_01003 Ancylostoma ceylanicum ANCCEY_01003 I 0.599
ENSTNIG00000016273 Tetraodon nigroviridis ENSTNIG00000016273 I 0.645
ENSXMAG00000003902 Xiphophorus maculatus ENSXMAG00000003902 I 0.645
HOXB2 Pan troglodytes ENSPTRG00000009352 I 0.611
GBX2 Oryzias latipes ENSORLG00000001376 I 0.603
ENSOCUG00000013528 Oryctolagus cuniculus ENSOCUG00000013528 I 0.684
ENSOARG00000003161 Ovis aries ENSOARG00000003161 I 0.645
ENSOANG00000003475 Ornithorhynchus anatinus ENSOANG00000003475 I 0.612
Tlx1 Mus musculus ENSMUSG00000025215 I 0.645
nDi.2.2.2.g10664 Dirofilaria immitis nDi.2.2.2.g10664 I 0.645
GRMZM2G123140 Zea mays GRMZM2G123140 I 0.855
SMU15011671 Schmidtea mediterranea SMU15011671 I 0.645
Gorai.003G184900 Gossypium raimondii Gorai.003G184900 I 0.812
Tal_R008067 Tyto alba Tal_R008067 I 0.611
Cmyd_10007464 Chelonia mydas Cmyd_10007464 I 0.645
Cmyd_10005403 Chelonia mydas Cmyd_10005403 I 0.602
Alligator_sinensis_CCG001661.1 Alligator sinensis Alligator_sinensis_CCG001661.1 I 0.602
nkx6-1 Xenopus tropicalis XB-GENE-483574 I 0.645
AATE009299 Anopheles atroparvus AATE009299 I 0.611
THITE_2107332 Thielavia terrestris THITE_2107332 I 0.612
TCM_016582 Theobroma cacao TCM_016582 I 0.812
TCM_013821 Theobroma cacao TCM_013821 I 0.609
AFAF006159 Anopheles farauti AFAF006159 I 0.651
hoxb2.S Xenopus laevis XB-GENE-478530 I 0.611
PPAI006607 Phlebotomus papatasi PPAI006607 I 0.645
ANCCAN_04049 Ancylostoma caninum ANCCAN_04049 I 0.599
GSTUM_00004451001 Tuber melanosporum GSTUM_00004451001 I 0.606
ENSMEUG00000015794 Macropus eugenii ENSMEUG00000015794 I 0.612
ENSMGAG00000010685 Meleagris gallopavo ENSMGAG00000010685 I 0.603
ENSCJAG00000004205 Callithrix jacchus ENSCJAG00000004205 I 0.632
ENSECAG00000002506 Equus caballus ENSECAG00000002506 I 0.616
CJA40511 Caenorhabditis japonica CJA40511 I 0.612
TCLT_0000655201 Thelazia callipaeda TCLT_0000655201 I 0.645
SPER_0001142801 Spirometra erinaceieuropaei SPER_0001142801 I 0.645
ENSAMXG00000008007 Astyanax mexicanus ENSAMXG00000008007 I 0.602
tlx2 Danio rerio ENSDARG00000011273 I 0.645
ENSACAG00000027662 Anolis carolinensis ENSACAG00000027662 I 0.612
ACHR008505 Anopheles christyi ACHR008505 N 0.635
SPAL_0000530600 Strongyloides papillosus SPAL_0000530600 N 0.605
SPER_0001728701 Spirometra erinaceieuropaei SPER_0001728701 N 0.614
SPER_0001567701 Spirometra erinaceieuropaei SPER_0001567701 N 0.603
AARA004444 Anopheles arabiensis AARA004444 N 0.612
AALB008451 Anopheles albimanus AALB008451 N 0.612
ACUA020431 Anopheles culicifacies ACUA020431 N 0.635
ADIR006385 Anopheles dirus ADIR006385 N 0.612
ACUA011088 Anopheles culicifacies ACUA011088 N 0.645
AEPI002733 Anopheles epiroticus AEPI002733 N 0.645
AEPI010384 Anopheles epiroticus AEPI010384 N 0.635
ASTEI00742 Anopheles stephensi ASTEI00742 N 0.632
AQUA015309 Anopheles quadriannulatus AQUA015309 N 0.665
AQUA009533 Anopheles quadriannulatus AQUA009533 N 0.612
AMIN006246 Anopheles minimus AMIN006246 N 0.613
SMTD_0001030501 Schistosoma mattheei SMTD_0001030501 N 0.674
AMIN002696 Anopheles minimus AMIN002696 N 0.612
AMEM011598 Anopheles merus AMEM011598 N 0.612
AMEM007254 Anopheles merus AMEM007254 N 0.611
AMAM008009 Anopheles maculatus AMAM008009 N 0.645
AFUN002980 Anopheles funestus AFUN002980 N 0.632
SMTD_0001153001 Schistosoma mattheei SMTD_0001153001 N 0.608
AEPI010666 Anopheles epiroticus AEPI010666 N 0.665
BGLB006778 Biomphalaria glabrata BGLB006778 N 0.617
PDK_20s1347391g002 Phoenix dactylifera PDK_20s1347391g002 N 0.822
T265_14387 Opisthorchis viverrini T265_14387 N 0.611
LCUP008695 Lucilia cuprina LCUP008695 N 0.612
HHAL009617-PA Halyomorpha halys HHAL009617-PA N 0.603
TCNE_0000505101 Toxocara canis TCNE_0000505101 N 0.618
HHAL004742-PA Halyomorpha halys HHAL004742-PA N 0.610
CLEC004114 Cimex lectularius CLEC004114 N 0.607
CLEC002615 Cimex lectularius CLEC002615 N 0.612
Pavir.Fa02028 Panicum virgatum Pavir.Fa02028 N 0.822
TRE_0000162501 Trichobilharzia regenti TRE_0000162501 N 0.605
gene25833-v1.0-hybrid Fragaria vesca gene25833-v1.0-hybrid N 0.767
gene23926-v1.0-hybrid Fragaria vesca gene23926-v1.0-hybrid N 0.822
LDEC004784 Leptinotarsa decemlineata LDEC004784 N 0.606
LDEC009173 Leptinotarsa decemlineata LDEC009173 N 0.645
LDEC016573 Leptinotarsa decemlineata LDEC016573 N 0.601
Minc14799 Meloidogyne incognita Minc14799 N 0.604
Minc02159 Meloidogyne incognita Minc02159 N 0.672
LjT36I04.40.nd Lotus japonicus LjT36I04.40.nd N 0.800
SROB_0001009601 Schistosoma rodhaini SROB_0001009601 N 0.612
PGSC0003DMG400013263 Solanum tuberosum PGSC0003DMG400013263 N 0.789
SNAPOd2T00015975001 Oikopleura dioica SNAPOd2T00015975001 N 0.646
SNAPOd2T00002147001 Oikopleura dioica SNAPOd2T00002147001 N 0.603
SVUK_0001081801 Strongylus vulgaris SVUK_0001081801 N 0.610
DICVIV_09128 Dictyocaulus viviparus DICVIV_09128 N 0.607
Sjc_0085440 Schistosoma japonicum Sjc_0085440 N 0.645
LDEC017208 Leptinotarsa decemlineata LDEC017208 N 0.651
PDK_20s1410161g001 Phoenix dactylifera PDK_20s1410161g001 N 0.800
NECAME_04746 Necator americanus NECAME_04746 N 0.613
ECPE_0000357901 Echinostoma caproni ECPE_0000357901 N 0.619
DME_0000044501 Dracunculus medinensis DME_0000044501 N 0.613
DILT_0000613101 Diphyllobothrium latum DILT_0000613101 N 0.603
PEQ_0000993201 Parascaris equorum PEQ_0000993201 N 0.605
PXEA_0003635301 Protopolystoma xenopodis PXEA_0003635301 N 0.645
DICVIV_02944 Dictyocaulus viviparus DICVIV_02944 N 0.623
DICVIV_01479 Dictyocaulus viviparus DICVIV_01479 N 0.607
csin109617 Clonorchis sinensis csin109617 N 0.677
BTMF_0001416601 Brugia timori BTMF_0001416601 N 0.645
BTMF_0000546301 Brugia timori BTMF_0000546301 N 0.614
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 N 0.700
EEL_0000533501 Elaeophora elaphi EEL_0000533501 N 0.620
GPUH_0000797801 Gongylonema pulchrum GPUH_0000797801 N 0.618
Hba_10254 Heterorhabditis bacteriophora Hba_10254 N 0.600
NECAME_08983 Necator americanus NECAME_08983 N 0.613
TRE_0000385401 Trichobilharzia regenti TRE_0000385401 N 0.645
NBR_0000086301 Nippostrongylus brasiliensis NBR_0000086301 N 0.608
maker-nMf.1.1.scaf28435-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf28435-augustus-gene-0.3 N 0.630
NECAME_11765 Necator americanus NECAME_11765 N 0.610
maker-nMf.1.1.scaf05303-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf05303-snap-gene-0.8 N 0.619
nOo.2.0.1.g12002 Onchocerca ochengi nOo.2.0.1.g12002 N 0.611
nRc.2.0.1.g08298 Romanomermis culicivorax nRc.2.0.1.g08298 N 0.651
HPBE_0002651601 Heligmosomoides bakeri HPBE_0002651601 N 0.610
HNAJ_0000607701 Hymenolepis nana HNAJ_0000607701 N 0.611
nRc.2.0.1.g21365 Romanomermis culicivorax nRc.2.0.1.g21365 N 0.669
ASIM_0001450801 Anisakis simplex ASIM_0001450801 N 0.631
ASIM_0000357501 Anisakis simplex ASIM_0000357501 N 0.608
ANCCAN_11756 Ancylostoma caninum ANCCAN_11756 N 0.616
ACOC_0000334101 Angiostrongylus costaricensis ACOC_0000334101 N 0.672
ACAC_0000093601 Angiostrongylus cantonensis ACAC_0000093601 N 0.672
A_05714 Schistosoma haematobium A_05714 N 0.607
PPAI007203 Phlebotomus papatasi PPAI007203 N 0.613
SMRZ_0000903001 Schistosoma margrebowiei SMRZ_0000903001 N 0.612
PPAI004705 Phlebotomus papatasi PPAI004705 N 0.645
LLOJ004702 Lutzomyia longipalpis LLOJ004702 N 0.600
BGLB012524 Biomphalaria glabrata BGLB012524 N 0.600
BGLB011885 Biomphalaria glabrata BGLB011885 N 0.605
BGLB007768 Biomphalaria glabrata BGLB007768 N 0.603
ANCCAN_14745 Ancylostoma caninum ANCCAN_14745 N 0.607
ANCCAN_18983 Ancylostoma caninum ANCCAN_18983 N 0.610
ANCCAN_19464 Ancylostoma caninum ANCCAN_19464 N 0.614
ASIM_0000175201 Anisakis simplex ASIM_0000175201 N 0.608
ASIM_0000060401 Anisakis simplex ASIM_0000060401 N 0.631
ANCDUO_16102 Ancylostoma duodenale ANCDUO_16102 N 0.612
ANCDUO_04800 Ancylostoma duodenale ANCDUO_04800 N 0.610
ANCCEY_10891 Ancylostoma ceylanicum ANCCEY_10891 N 0.672
SBAD_0000495201 Soboliphyme baturini SBAD_0000495201 N 0.611
ANCCEY_10591 Ancylostoma ceylanicum ANCCEY_10591 N 0.610
scaffold61-EXSNAP2012.75 Pristionchus exspectatus scaffold61-EXSNAP2012.75 N 0.665
SCUD_0000383301 Schistosoma curassoni SCUD_0000383301 N 0.599
ANCCAN_27026 Ancylostoma caninum ANCCAN_27026 N 0.672
ANCCAN_23849 Ancylostoma caninum ANCCAN_23849 N 0.609
BGLB007714 Biomphalaria glabrata BGLB007714 N 0.603
ISCW012145 Ixodes scapularis ISCW012145 N 0.645
ENSTSYG00000005123 Tarsius syrichta ENSTSYG00000005123 N 0.600
ENSTRUG00000017602 Takifugu rubripes ENSTRUG00000017602 N 0.658
TLX3 Taeniopygia guttata ENSTGUG00000014966 N 0.672
ENSTGUG00000000339 Taeniopygia guttata ENSTGUG00000000339 N 0.605
VAX2 Sus scrofa ENSSSCG00000008318 N 0.645
ENSPVAG00000007998 Pteropus vampyrus ENSPVAG00000007998 N 0.640
ENSPTRG00000017522 Pan troglodytes ENSPTRG00000017522 N 0.672
ENSPPYG00000018545 Pongo abelii ENSPPYG00000018545 N 0.612
ENSPCAG00000005898 Procavia capensis ENSPCAG00000005898 N 0.612
ENSPANG00000014739 Papio anubis ENSPANG00000014739 N 0.612
TLX2 Ochotona princeps ENSOPRG00000014031 N 0.609
EMX1 Oryctolagus cuniculus ENSOCUG00000008208 N 0.651
NKX6-3 Tursiops truncatus ENSTTRG00000003567 N 0.612
ENSXMAG00000013191 Xiphophorus maculatus ENSXMAG00000013191 N 0.602
F775_01938 Aegilops tauschii F775_01938 N 0.603
ISCW010454 Ixodes scapularis ISCW010454 N 0.645
HMEL016138 Heliconius melpomene HMEL016138 N 0.603
HMEL006102 Heliconius melpomene HMEL006102 N 0.624
HelroG192586 Helobdella robusta HelroG192586 N 0.651
GSMUA_Achr3G23090_001 Musa acuminata GSMUA_Achr3G23090_001 N 0.822
GRMZM2G381748 Zea mays GRMZM2G381748 N 0.612
GRMZM2G004334 Zea mays GRMZM2G004334 N 0.845
GLYMA08G09430 Glycine max GLYMA08G09430 N 0.738
GI23625 Drosophila mojavensis FBgn0146351 N 0.679
GH13586 Drosophila grimshawi FBgn0121062 N 0.608
F775_10961 Aegilops tauschii F775_10961 N 0.768
F775_07305 Aegilops tauschii F775_07305 N 0.608
ENSOARG00000010209 Ovis aries ENSOARG00000010209 N 0.640
BARX2 Ornithorhynchus anatinus ENSOANG00000000573 N 0.603
BRADI3G23370 Brachypodium distachyon BRADI3G23370 N 0.799
BRADI2G50510 Brachypodium distachyon BRADI2G50510 N 0.767
Bo1g131210 Brassica oleracea Bo1g131210 N 0.725
Bm8478 Brugia malayi Bm8478 N 0.612
BGIBMGA010052 Bombyx mori BGIBMGA010052 N 0.623
BGIBMGA003265 Bombyx mori BGIBMGA003265 N 0.603
ACYPI086517 Acyrthosiphon pisum ACYPI086517 N 0.645
ACEP24283 Atta cephalotes ACEP24283 N 0.600
ACEP22770 Atta cephalotes ACEP22770 N 0.645
WUBG_18725 Wuchereria bancrofti WUBG_18725 N 0.602
WUBG_09511 Wuchereria bancrofti WUBG_09511 N 0.605
WUBG_03180 Wuchereria bancrofti WUBG_03180 N 0.608
CGI_10026625 Crassostrea gigas CGI_10026625 N 0.603
CPIJ001378 Culex quinquefasciatus CPIJ001378 N 0.612
ENSACAG00000000961 Anolis carolinensis ENSACAG00000000961 N 0.612
ENSMMUG00000014725 Macaca mulatta ENSMMUG00000014725 N 0.612
ENSMLUG00000022220 Myotis lucifugus ENSMLUG00000022220 N 0.603
ENSMGAG00000009298 Meleagris gallopavo ENSMGAG00000009298 N 0.600
DLX3 Loxodonta africana ENSLAFG00000028511 N 0.600
VAX1 Loxodonta africana ENSLAFG00000018107 N 0.660
ENSGALG00000020423 Gallus gallus ENSGALG00000020423 N 0.628
hoxc12a Gasterosteus aculeatus ENSGACG00000009391 N 0.617
ENSFCAG00000025984 Felis catus ENSFCAG00000025984 N 0.618
HMX2 Felis catus ENSFCAG00000023440 N 0.616
ENSCSAG00000006765 Chlorocebus sabaeus ENSCSAG00000006765 N 0.618
NKX6-3 Canis familiaris ENSCAFG00000005710 N 0.612
ENSACAG00000005787 Anolis carolinensis ENSACAG00000005787 N 0.612
CpipJ_CPIJ001378 Culex pipiens CpipJ_CPIJ001378 N 0.612
Carubv10007218m.g Capsella rubella Carubv10007218m.g N 0.818
YQE_10731 Dendroctonus ponderosae YQE_10731 N 0.665
TRIUR3_33331 Triticum urartu TRIUR3_33331 N 0.616
TRIUR3_32002 Triticum urartu TRIUR3_32002 N 0.688
TRIUR3_29318 Triticum urartu TRIUR3_29318 N 0.667
Traes_6DL_D722B6E13 Triticum aestivum Traes_6DL_D722B6E13 N 0.800
Traes_6BL_4301B7F15 Triticum aestivum Traes_6BL_4301B7F15 N 0.820
TRAES3BF096700040CFD_g Triticum aestivum TRAES3BF096700040CFD_g N 0.668
TRAES3BF096700010CFD_g Triticum aestivum TRAES3BF096700010CFD_g N 0.675
Traes_3AL_F42853DA5 Triticum aestivum Traes_3AL_F42853DA5 N 0.741
Traes_2AL_AAEBFA9CC Triticum aestivum Traes_2AL_AAEBFA9CC N 0.599
Traes_1DS_AAEBFA9CC Triticum aestivum Traes_1DS_AAEBFA9CC N 0.599
Traes_1DL_9FB53E48A Triticum aestivum Traes_1DL_9FB53E48A N 0.855
YQE_12889 Dendroctonus ponderosae YQE_12889 N 0.645
Alligator_sinensis_CCG004967.1 Alligator sinensis Alligator_sinensis_CCG004967.1 N 0.618
Alligator_sinensis_CCG010660.1 Alligator sinensis Alligator_sinensis_CCG010660.1 N 0.607
Ocbimv22024994m.g Octopus bimaculoides Ocbimv22024994m.g N 0.693
Ocbimv22010205m.g Octopus bimaculoides Ocbimv22010205m.g N 0.605
mgf006959m Mimulus guttatus mgf006959m N 0.845
e_gw.11.656.1 Branchiostoma floridae e_gw.11.656.1 N 0.599
cassava13400.valid.m1 Manihot esculenta cassava13400.valid.m1 N 0.843
Tal_R011355 Tyto alba Tal_R011355 N 0.637
Tal_R004953 Tyto alba Tal_R004953 N 0.602
Cmyd_10012338 Chelonia mydas Cmyd_10012338 N 0.612
Cla017350 Citrullus lanatus Cla017350 N 0.602
Ca_23643 Cicer arietinum Ca_23643 N 0.605
Ca_19697 Cicer arietinum Ca_19697 N 0.686
Ca_08015 Cicer arietinum Ca_08015 N 0.775
Traes_1AS_CA75913B6 Triticum aestivum Traes_1AS_CA75913B6 N 0.606
SPU_022574 Strongylocentrotus purpuratus SPU_022574 N 0.637
OLONG_008306 Oryza longistaminata OLONG_008306 N 0.845
NEMVEDRAFT_v1g101680 Nematostella vectensis NEMVEDRAFT_v1g101680 N 0.608
MESCA006388 Megaselia scalaris MESCA006388 N 0.645
MCINX004708 Melitaea cinxia MCINX004708 N 0.645
M437DRAFT_40473 Aureobasidium melanogenum M437DRAFT_40473 N 0.607
M378DRAFT_56764 Amanita muscaria M378DRAFT_56764 N 0.616
LOAG_18696 Loa loa LOAG_18696 N 0.611
LOAG_07462 Loa loa LOAG_07462 N 0.612
LACBIDRAFT_243459 Laccaria bicolor LACBIDRAFT_243459 N 0.643
KGM_17085 Danaus plexippus KGM_17085 N 0.645
KGM_15359 Danaus plexippus KGM_15359 N 0.608
K443DRAFT_111002 Laccaria amethystina K443DRAFT_111002 N 0.622
OLONG_012459 Oryza longistaminata OLONG_012459 N 0.823
OLONG_017944 Oryza longistaminata OLONG_017944 N 0.762
OMERI08G08060 Oryza meridionalis OMERI08G08060 N 0.742
Smp_136900 Schistosoma mansoni Smp_136900 N 0.604
SINV22981 Solenopsis invicta SINV22981 N 0.665
RPRC003713 Rhodnius prolixus RPRC003713 N 0.645
PPA28666 Pristionchus pacificus PPA28666 N 0.657
PPA04715 Pristionchus pacificus PPA04715 N 0.612
POPTR_0012s03550 Populus trichocarpa POPTR_0012s03550 N 0.845
PHUM359910 Pediculus humanus PHUM359910 N 0.645
PHUM359880 Pediculus humanus PHUM359880 N 0.645
PHUM118950 Pediculus humanus PHUM118950 N 0.651
PGSC0003DMG400019030 Solanum tuberosum PGSC0003DMG400019030 N 0.772
PGSC0003DMG400007775 Solanum tuberosum PGSC0003DMG400007775 N 0.674
OS01G0788800 Oryza sativa OS01G0788800 N 0.762
ISCW012461 Ixodes scapularis ISCW012461 N 0.609