orange1.1g040555m.g (Citrus sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 orange1.1g040555m.g T229182_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g040555m Homeodomain 117 175

Links

Other Homeodomain family TFs
Other Citrus sinensis TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10033544m.g Citrus clementina Ciclev10033544m.g N 0.867
evm.TU.supercontig_195.45 Carica papaya evm.TU.supercontig_195.45 N 0.815
OBART11G03800 Oryza barthii OBART11G03800 I 0.795
evm.TU.supercontig_78.15 Carica papaya evm.TU.supercontig_78.15 N 0.781
gene02674-v1.0-hybrid Fragaria vesca gene02674-v1.0-hybrid N 0.781
Cucsa.395170 Cucumis sativus Cucsa.395170 N 0.781
Cla023019 Citrullus lanatus Cla023019 N 0.781
GSMUA_Achr4G12180_001 Musa acuminata GSMUA_Achr4G12180_001 N 0.779
PK17736.1 Cannabis sativa PK17736.1 N 0.766
OLONG_016371 Oryza longistaminata OLONG_016371 I 0.763
MTR_2g095050 Medicago truncatula MTR_2g095050 N 0.760
GRMZM2G161435 Zea mays GRMZM2G161435 I 0.750
LjSGA_061861.1 Lotus japonicus LjSGA_061861.1 I 0.748
SapurV1A.0006s0130 Salix purpurea SapurV1A.0006s0130 N 0.723
POPTR_0002s03240 Populus trichocarpa POPTR_0002s03240 N 0.723
Thhalv10002247m.g Eutrema salsugineum Thhalv10002247m.g N 0.718
GSMUA_Achr4G02680_001 Musa acuminata GSMUA_Achr4G02680_001 N 0.696
PDK_20s1614221g001 Phoenix dactylifera PDK_20s1614221g001 I 0.678
Sb04g008030 Sorghum bicolor Sb04g008030 I 0.666
OB12G13660 Oryza brachyantha OB12G13660 N 0.649