Pavir.Eb03234 (Panicum virgatum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pavir.Eb03234 T229257_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb03234.1.p Homeodomain 89 136

Links

Other Homeodomain family TFs
Other Panicum virgatum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra015119 Brassica rapa Bra015119 N 0.733
VIT_13s0067g01580 Vitis vinifera VIT_13s0067g01580 N 0.711
BGIOSGA000782 Oryza indica BGIOSGA000782 N 0.689
OMERI01G28810 Oryza meridionalis OMERI01G28810 N 0.689
VIT_14s0030g02130 Vitis vinifera VIT_14s0030g02130 N 0.683
ONIVA08G05020 Oryza nivara ONIVA08G05020 N 0.678
ORUFI08G05670 Oryza rufipogon ORUFI08G05670 N 0.678
OPUNC08G04870 Oryza punctata OPUNC08G04870 N 0.678
OGLUM08G05340 Oryza glumaepatula OGLUM08G05340 N 0.678
BGIOSGA028102 Oryza indica BGIOSGA028102 N 0.678
OBART08G05070 Oryza barthii OBART08G05070 N 0.678
GSMUA_Achr8G07310_001 Musa acuminata GSMUA_Achr8G07310_001 N 0.678
LPERR08G04930 Leersia perrieri LPERR08G04930 N 0.678
GSMUA_Achr11G21700_001 Musa acuminata GSMUA_Achr11G21700_001 N 0.674
Solyc09g060160.1 Solanum lycopersicum Solyc09g060160.1 N 0.623