Pavir.Ib01521 (Panicum virgatum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pavir.Ib01521 T229310_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WOX11
M06916_2.00
Arabidopsis thaliana
ADTTAATTAVD

HBTAATTAAHT
Dap-seq
OMalley et al.(2016)
WOX11_col_a
0.757 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib01521.1.p Homeodomain 46 107

Links

Other Homeodomain family TFs
Other Panicum virgatum TFs

Invalid Input OrderBy

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action