Pavir.J34132 (Panicum virgatum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pavir.J34132 T229367_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HOX6
M02157_2.00 		Oryza sativa
DTGATTRVNN
NNBYAATCAH		 PBM
Weirauch et al.(2014)
pTH6378 		0.625 0.775
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J34132.1.p Homeodomain 1 41

Links

Other Homeodomain family TFs
Other Panicum virgatum TFs

Invalid Input OrderBy

478 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action