SapurV1A.0042s0570 (Salix purpurea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SapurV1A.0042s0570 T229401_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.626 0.839
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0042s0570.10.p Homeodomain 1 29
SapurV1A.0042s0570.1.p Homeodomain 20 75
SapurV1A.0042s0570.2.p Homeodomain 20 75
SapurV1A.0042s0570.3.p Homeodomain 6 61
SapurV1A.0042s0570.4.p Homeodomain 20 75
SapurV1A.0042s0570.5.p Homeodomain 1 29
SapurV1A.0042s0570.6.p Homeodomain 1 29
SapurV1A.0042s0570.7.p Homeodomain 20 75
SapurV1A.0042s0570.8.p Homeodomain 20 75
SapurV1A.0042s0570.9.p Homeodomain 1 29

Links

Other Homeodomain family TFs
Other Salix purpurea TFs

Invalid Input OrderBy

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action