SapurV1A.0106s0340 (Salix purpurea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SapurV1A.0106s0340 T229422_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK25011.1
M01253_2.00
Cannabis sativa
NNWYRMDBNN

NNVHKYRWNN
PBM
Lambert et al.(2019)
pTH11258
0.656 0.807
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0106s0340.1.p Homeodomain 23 79

Links

Other Homeodomain family TFs
Other Salix purpurea TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0009s07600 Populus trichocarpa POPTR_0009s07600 I 0.864
POPTR_0001s28350 Populus trichocarpa POPTR_0001s28350 I 0.854
TCM_040945 Theobroma cacao TCM_040945 I 0.809
SapurV1A.0042s0570 Salix purpurea SapurV1A.0042s0570 I 0.800
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I 0.778
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.758
Aquca_014_00610 Aquilegia coerulea Aquca_014_00610 I 0.691
PK25011.1 Cannabis sativa PK25011.1 D 0.656
Gorai.001G134800 Gossypium raimondii Gorai.001G134800 I 0.647
mgf007720m Mimulus guttatus mgf007720m I 0.633
cassava16534.m1 Manihot esculenta cassava16534.m1 I 0.632
VIT_06s0009g03530 Vitis vinifera VIT_06s0009g03530 I 0.629
mgf000172m Mimulus guttatus mgf000172m I 0.620
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I 0.619
Bostr.2983s0116 Boechera stricta Bostr.2983s0116 I 0.619
Carubv10002996m.g Capsella rubella Carubv10002996m.g I 0.619
Bo9g006450 Brassica oleracea Bo9g006450 I 0.614
Bra034196 Brassica rapa Bra034196 I 0.614
AT4G03250 Arabidopsis thaliana AT4G03250 I 0.613
Cla008712 Citrullus lanatus Cla008712 I 0.612
MDP0000207866 Malus domestica MDP0000207866 I 0.610
Ciclev10014928m.g Citrus clementina Ciclev10014928m.g I 0.610
orange1.1g010311m.g Citrus sinensis orange1.1g010311m.g I 0.610
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.607
PDK_20s1551001g001 Phoenix dactylifera PDK_20s1551001g001 I 0.604
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.600
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.600
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.600