SapurV1A.0118s0310 (Salix purpurea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SapurV1A.0118s0310 T229423_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.669 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0118s0310.1.p Homeodomain 26 82
SapurV1A.0118s0310.2.p Homeodomain 26 82
SapurV1A.0118s0310.3.p Homeodomain 26 82
SapurV1A.0118s0310.4.p Homeodomain 26 82

Links

Other Homeodomain family TFs
Other Salix purpurea TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0007s01330 Populus trichocarpa POPTR_0007s01330 I 0.867
SapurV1A.3333s0010 Salix purpurea SapurV1A.3333s0010 I 0.867
SapurV1A.3547s0010 Salix purpurea SapurV1A.3547s0010 I 0.867
cassava43653.valid.m1 Manihot esculenta cassava43653.valid.m1 I 0.866
29983.m003128 Ricinus communis 29983.m003128 I 0.866
SapurV1A.0693s0030 Salix purpurea SapurV1A.0693s0030 I 0.866
Eucgr.K01058 Eucalyptus grandis Eucgr.K01058 I 0.861
POPTR_0017s04760 Populus trichocarpa POPTR_0017s04760 I 0.861
Bo7g067190 Brassica oleracea Bo7g067190 I 0.855
VIT_12s0028g03080 Vitis vinifera VIT_12s0028g03080 I 0.854
Bra033725 Brassica rapa Bra033725 I 0.853
Cagra.0381s0009 Capsella grandiflora Cagra.0381s0009 I 0.844
Carubv10025737m.g Capsella rubella Carubv10025737m.g I 0.844
Thhalv10003131m.g Eutrema salsugineum Thhalv10003131m.g I 0.843
Bostr.3148s0041 Boechera stricta Bostr.3148s0041 I 0.843
fgenesh2_kg.8__392__AT5G44180.1 Arabidopsis lyrata fgenesh2_kg.8__392__AT5G44180.1 I 0.843
orange1.1g004454m.g Citrus sinensis orange1.1g004454m.g I 0.828
RLT2 Arabidopsis thaliana AT5G44180 I 0.828
Ciclev10014022m.g Citrus clementina Ciclev10014022m.g I 0.828
Lus10039870.g Linum usitatissimum Lus10039870.g I 0.825
Lus10018634.g Linum usitatissimum Lus10018634.g I 0.825
Gorai.008G155100 Gossypium raimondii Gorai.008G155100 I 0.824
TCM_008214 Theobroma cacao TCM_008214 I 0.824
GLYMA06G44290 Glycine max GLYMA06G44290 I 0.821
Aquca_051_00028 Aquilegia coerulea Aquca_051_00028 I 0.817
Solyc07g053610.2 Solanum lycopersicum Solyc07g053610.2 I 0.817
PK06068.1 Cannabis sativa PK06068.1 I 0.812
Ca_11272 Cicer arietinum Ca_11272 I 0.811
gene17756-v1.0-hybrid Fragaria vesca gene17756-v1.0-hybrid I 0.779
SELMODRAFT_447089 Selaginella moellendorffii SELMODRAFT_447089 I 0.775
SELMODRAFT_447019 Selaginella moellendorffii SELMODRAFT_447019 I 0.775
Lus10017688.g Linum usitatissimum Lus10017688.g N 0.773
GSMUA_Achr6G26980_001 Musa acuminata GSMUA_Achr6G26980_001 I 0.769
AMTR_s00058p00137050 Amborella trichopoda AMTR_s00058p00137050 I 0.757
SELMODRAFT_422900 Selaginella moellendorffii SELMODRAFT_422900 I 0.754
SELMODRAFT_428998 Selaginella moellendorffii SELMODRAFT_428998 I 0.754
Bra010869 Brassica rapa Bra010869 I 0.704
Bo3g143570 Brassica oleracea Bo3g143570 I 0.704
MTR_4g078860 Medicago truncatula MTR_4g078860 N 0.691
MTR_3g045830 Medicago truncatula MTR_3g045830 I 0.690
evm.TU.supercontig_83.97 Carica papaya evm.TU.supercontig_83.97 I 0.687
PDK_20s1551001g001 Phoenix dactylifera PDK_20s1551001g001 I 0.684
gene29752-v1.0-hybrid Fragaria vesca gene29752-v1.0-hybrid I 0.679
evm.TU.supercontig_27.2 Carica papaya evm.TU.supercontig_27.2 I 0.679
Lus10015400.g Linum usitatissimum Lus10015400.g I 0.676
Lus10013979.g Linum usitatissimum Lus10013979.g I 0.676
MDP0000288192 Malus domestica MDP0000288192 I 0.675
orange1.1g000279m.g Citrus sinensis orange1.1g000279m.g I 0.675
SapurV1A.0012s0660 Salix purpurea SapurV1A.0012s0660 I 0.675
MDP0000192108 Malus domestica MDP0000192108 I 0.675
Ciclev10014023m.g Citrus clementina Ciclev10014023m.g I 0.675
Pm010098 Prunus mume Pm010098 I 0.675
Cla009803 Citrullus lanatus Cla009803 I 0.675
Cucsa.046480 Cucumis sativus Cucsa.046480 I 0.675
cassava1593.valid.m1 Manihot esculenta cassava1593.valid.m1 I 0.675
PRUPE_ppa000115mg Prunus persica PRUPE_ppa000115mg I 0.675
MTR_2g014490 Medicago truncatula MTR_2g014490 I 0.675
GLYMA07G32180 Glycine max GLYMA07G32180 I 0.674
GLYMA13G24370 Glycine max GLYMA13G24370 I 0.674
Cagra.1822s0015 Capsella grandiflora Cagra.1822s0015 I 0.674
GLYMA13G30860 Glycine max GLYMA13G30860 I 0.674
HB-1 Arabidopsis lyrata fgenesh2_kg.1__3015__AT1G28420.1 I 0.674
Thhalv10006543m.g Eutrema salsugineum Thhalv10006543m.g I 0.673
Bostr.15697s0165 Boechera stricta Bostr.15697s0165 I 0.673
SapurV1A.0032s0540 Salix purpurea SapurV1A.0032s0540 I 0.673
PDK_20s1402391g002 Phoenix dactylifera PDK_20s1402391g002 I 0.672
Bra032908 Brassica rapa Bra032908 I 0.672
Cla008712 Citrullus lanatus Cla008712 I 0.671
Bo5g055970 Brassica oleracea Bo5g055970 I 0.671
BGIOSGA022450 Oryza indica BGIOSGA022450 I 0.670
ORGLA05G0222200 Oryza glaberrima ORGLA05G0222200 I 0.670
ONIVA05G27640 Oryza nivara ONIVA05G27640 I 0.670
OGLUM05G27370 Oryza glumaepatula OGLUM05G27370 I 0.670
OBART05G25730 Oryza barthii OBART05G25730 I 0.670
MTR_4g088375 Medicago truncatula MTR_4g088375 I 0.670
Ca_00337 Cicer arietinum Ca_00337 I 0.670
LPERR05G21380 Leersia perrieri LPERR05G21380 I 0.670
ORUFI05G27630 Oryza rufipogon ORUFI05G27630 I 0.670
Ca_06343 Cicer arietinum Ca_06343 I 0.670
MDP0000207866 Malus domestica MDP0000207866 I 0.669
RLT1 Arabidopsis thaliana AT1G28420 D 0.669
PK13272.1 Cannabis sativa PK13272.1 I 0.668
VIT_10s0003g00290 Vitis vinifera VIT_10s0003g00290 I 0.668
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.666
POPTR_0011s05660 Populus trichocarpa POPTR_0011s05660 I 0.664
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.661
Gorai.010G243500 Gossypium raimondii Gorai.010G243500 I 0.659
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.659
TCM_029805 Theobroma cacao TCM_029805 I 0.659
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.659
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.659
Gorai.010G256900 Gossypium raimondii Gorai.010G256900 I 0.659
Ca_21400 Cicer arietinum Ca_21400 I 0.657
Lus10015325.g Linum usitatissimum Lus10015325.g I 0.656
Lus10025454.g Linum usitatissimum Lus10025454.g I 0.656
MTR_5g089870 Medicago truncatula MTR_5g089870 N 0.653
Solyc02g077660.2 Solanum lycopersicum Solyc02g077660.2 I 0.653
Pavir.Ca00923 Panicum virgatum Pavir.Ca00923 I 0.650
Pavir.J20612 Panicum virgatum Pavir.J20612 I 0.650
Si020949m.g Setaria italica Si020949m.g I 0.650
Eucgr.D00596 Eucalyptus grandis Eucgr.D00596 I 0.649
GRMZM2G125294 Zea mays GRMZM2G125294 I 0.648
GRMZM2G122750 Zea mays GRMZM2G122750 I 0.648
fgenesh1_pg.scaffold_15000027 Physcomitrella patens fgenesh1_pg.scaffold_15000027 I 0.640
mgf006858m Mimulus guttatus mgf006858m I 0.639
OB01G35240 Oryza brachyantha OB01G35240 I 0.637
BGIOSGA004179 Oryza indica BGIOSGA004179 I 0.637
GRMZM2G159357 Zea mays GRMZM2G159357 I 0.637
GRMZM2G060541 Zea mays GRMZM2G060541 I 0.637
LPERR01G22320 Leersia perrieri LPERR01G22320 I 0.637
ORUFI01G29060 Oryza rufipogon ORUFI01G29060 I 0.637
OGLUM01G29920 Oryza glumaepatula OGLUM01G29920 I 0.637
Si004333m.g Setaria italica Si004333m.g I 0.637
OMERI01G23740 Oryza meridionalis OMERI01G23740 I 0.637
ONIVA01G29520 Oryza nivara ONIVA01G29520 I 0.637
OPUNC01G25990 Oryza punctata OPUNC01G25990 I 0.637
OS01G0672201 Oryza sativa OS01G0672201 I 0.637
BRADI2G16647 Brachypodium distachyon BRADI2G16647 I 0.633
Sb03g030782 Sorghum bicolor Sb03g030782 I 0.632
Sb03g030770 Sorghum bicolor Sb03g030770 I 0.632
BRADI2G46230 Brachypodium distachyon BRADI2G46230 I 0.631
MLOC_62571 Hordeum vulgare MLOC_62571 I 0.631
F775_01844 Aegilops tauschii F775_01844 I 0.631
mgf006635m Mimulus guttatus mgf006635m I 0.620
30190.m011307 Ricinus communis 30190.m011307 I 0.619
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I 0.608
Carubv10002996m.g Capsella rubella Carubv10002996m.g I 0.608
AT4G03250 Arabidopsis thaliana AT4G03250 I 0.608
Thhalv10028592m.g Eutrema salsugineum Thhalv10028592m.g I 0.606
Bo9g006450 Brassica oleracea Bo9g006450 I 0.604
Bra034196 Brassica rapa Bra034196 I 0.604