SapurV1A.0370s0160 (Salix purpurea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SapurV1A.0370s0160 T229464_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.867 0.982
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.867 0.982
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.861 0.893
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.861 0.893
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.861 0.893
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0370s0160.1.p Homeodomain 17 76

Links

Other Homeodomain family TFs
Other Salix purpurea TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BXY_1091200 Bursaphelenchus xylophilus BXY_1091200 I 0.000
BXY_1189000 Bursaphelenchus xylophilus BXY_1189000 I 0.000
CBN22974 Caenorhabditis brenneri CBN22974 I 0.000
CBN24070 Caenorhabditis brenneri CBN24070 I 0.000
CBN03440 Caenorhabditis brenneri CBN03440 I 0.000
CBN03769 Caenorhabditis brenneri CBN03769 I 0.000
CBN04619 Caenorhabditis brenneri CBN04619 I 0.000
CBN16902 Caenorhabditis brenneri CBN16902 I 0.000
CBN18264 Caenorhabditis brenneri CBN18264 I 0.000
CBG04789 Caenorhabditis briggsae CBG04789 I 0.000
CBG20699 Caenorhabditis briggsae CBG20699 I 0.000
CBG16375 Caenorhabditis briggsae CBG16375 I 0.000
CBG12152 Caenorhabditis briggsae CBG12152 I 0.000
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.000
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.000
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.000
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.000
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.000
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.000
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.000
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.000
CJA10576 Caenorhabditis japonica CJA10576 I 0.000
CJA04414 Caenorhabditis japonica CJA04414 I 0.000
CJA07390 Caenorhabditis japonica CJA07390 I 0.000
CRE27659 Caenorhabditis remanei CRE27659 I 0.000
CRE27174 Caenorhabditis remanei CRE27174 I 0.000
CRE18529 Caenorhabditis remanei CRE18529 I 0.000
CRE17354 Caenorhabditis remanei CRE17354 I 0.000
CRE09011 Caenorhabditis remanei CRE09011 I 0.000
L889_g987 Steinernema feltiae L889_g987 I 0.000
L889_g9698 Steinernema feltiae L889_g9698 I 0.000
L889_g10781 Steinernema feltiae L889_g10781 I 0.000
L893_g4569 Steinernema glaseri L893_g4569 I 0.000
L892_g8145 Steinernema scapterisci L892_g8145 I 0.000
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.000