CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0370s0160
(
Salix purpurea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
SapurV1A.0370s0160
T229464_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATHB-15
M00864_2.00
Arabidopsis thaliana
AATAATTACT
AGTAATTATT
PBM
Franco-Zorrilla et al.(2014)
ICU4
0.867
0.982
ATHB-15
M06899_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
ATHB15_col_a
0.867
0.982
ATHB-9
M06898_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
PHV_col_a
0.861
0.893
ATHB-9
M02682_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND
SELEX
Mathelier et al.(2014)
MA0573.1
0.861
0.893
ATHB-9
M10623_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND
Transfac
Matys et al.(2006)
P$ATHB9_01
0.861
0.893
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0370s0160.1.p
Homeodomain
17
76
GKYVRYTPEQVEALERLYHDCPKPSSIRRHQLIRECPILSNIEPKQIKVWFQNRRCREKQ
Links
Other
Homeodomain
family TFs
Other
Salix purpurea
TFs
335 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BXY_1091200
Bursaphelenchus xylophilus
BXY_1091200
I
0.000
BXY_1189000
Bursaphelenchus xylophilus
BXY_1189000
I
0.000
CBN22974
Caenorhabditis brenneri
CBN22974
I
0.000
CBN24070
Caenorhabditis brenneri
CBN24070
I
0.000
CBN03440
Caenorhabditis brenneri
CBN03440
I
0.000
CBN03769
Caenorhabditis brenneri
CBN03769
I
0.000
CBN04619
Caenorhabditis brenneri
CBN04619
I
0.000
CBN16902
Caenorhabditis brenneri
CBN16902
I
0.000
CBN18264
Caenorhabditis brenneri
CBN18264
I
0.000
CBG04789
Caenorhabditis briggsae
CBG04789
I
0.000
CBG20699
Caenorhabditis briggsae
CBG20699
I
0.000
CBG16375
Caenorhabditis briggsae
CBG16375
I
0.000
CBG12152
Caenorhabditis briggsae
CBG12152
I
0.000
nhr-53
Caenorhabditis elegans
WBGene00003643
I
0.000
nhr-28
Caenorhabditis elegans
WBGene00003624
I
0.000
nhr-16
Caenorhabditis elegans
WBGene00003615
I
0.000
nhr-12
Caenorhabditis elegans
WBGene00003611
I
0.000
nhr-86
Caenorhabditis elegans
WBGene00003676
D
0.000
nhr-109
Caenorhabditis elegans
WBGene00003699
I
0.000
nhr-273
Caenorhabditis elegans
WBGene00020460
I
0.000
nhr-70
Caenorhabditis elegans
WBGene00003660
D
0.000
CJA10576
Caenorhabditis japonica
CJA10576
I
0.000
CJA04414
Caenorhabditis japonica
CJA04414
I
0.000
CJA07390
Caenorhabditis japonica
CJA07390
I
0.000
CRE27659
Caenorhabditis remanei
CRE27659
I
0.000
CRE27174
Caenorhabditis remanei
CRE27174
I
0.000
CRE18529
Caenorhabditis remanei
CRE18529
I
0.000
CRE17354
Caenorhabditis remanei
CRE17354
I
0.000
CRE09011
Caenorhabditis remanei
CRE09011
I
0.000
L889_g987
Steinernema feltiae
L889_g987
I
0.000
L889_g9698
Steinernema feltiae
L889_g9698
I
0.000
L889_g10781
Steinernema feltiae
L889_g10781
I
0.000
L893_g4569
Steinernema glaseri
L893_g4569
I
0.000
L892_g8145
Steinernema scapterisci
L892_g8145
I
0.000
SMUV_0000801801
Syphacia muris
SMUV_0000801801
I
0.000