SapurV1A.1157s0010 (Salix purpurea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SapurV1A.1157s0010 T229505_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KNAT7
M01064_2.00
Arabidopsis thaliana
TGACRKST

ASMYGTCA
PBM
Sullivan et al.(2014)
pTH9798
0.731 0.600
KNAT4
M01238_2.00
Arabidopsis thaliana
NNGACNNNN

NNNNGTCNN
PBM
Lambert et al.(2019)
pTH9968
0.731 0.600
KNAT3
M02051_2.00
Arabidopsis thaliana
NNNGACVBNN

NNVBGTCNNN
PBM
Weirauch et al.(2014)
pTH7600
0.731 0.600
HOS66
M02156_2.00
Oryza sativa
NNNNDHNN

NNDHNNNN
PBM
Weirauch et al.(2014)
pTH8332
0.718 0.620
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN

NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.612 0.458
PK25034.1
M01254_2.00
Cannabis sativa
NNTGACRKBN

NVMYGTCANN
PBM
Lambert et al.(2019)
pTH11259
0.714 0.820
MEIS3
M03093_2.00
Homo sapiens
DTGACANN

NNTGTCAH
SELEX
Jolma et al.(2013)
MEIS3_1
0.608 0.396
MEIS3
M03094_2.00
Homo sapiens
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
MEIS3_2
0.608 0.396
MEIS3
M04951_2.00
Homo sapiens
TGWCABVTGWCA

TGWCABVTGWCA
SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX
0.608 0.396
MEIS3
M04952_2.00
Homo sapiens
YGWCABVTGWCR

YGWCABVTGWCR
SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX
0.608 0.396
ATH1
M10627_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATH1_01
0.607 0.420
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.1157s0010.1.p Homeodomain 235 287
SapurV1A.1157s0010.2.p Homeodomain 235 285

Links

Other Homeodomain family TFs
Other Salix purpurea TFs

1230 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG017936.1 Alligator sinensis Alligator_sinensis_CCG017936.1 I 0.000
Cmyd_10005916 Chelonia mydas Cmyd_10005916 I 0.000
ENSACAG00000016965 Anolis carolinensis ENSACAG00000016965 I 0.000
ENSAMEG00000010478 Ailuropoda melanoleuca ENSAMEG00000010478 I 0.000
ENSAMXG00000005448 Astyanax mexicanus ENSAMXG00000005448 I 0.000
ZNF653 Bos taurus ENSBTAG00000014415 I 0.000
ZNF653 Canis familiaris ENSCAFG00000031712 I 0.000
ZNF653 Callithrix jacchus ENSCJAG00000005551 I 0.000
ZNF653 Cavia porcellus ENSCPOG00000010842 I 0.000
ENSCSAG00000006753 Chlorocebus sabaeus ENSCSAG00000006753 I 0.000
znf653 Danio rerio ENSDARG00000093469 I 0.000
ZNF653 Felis catus ENSFCAG00000004922 I 0.000
ZNF653 Homo sapiens ENSG00000161914 D 0.000
ENSLOCG00000008078 Lepisosteus oculatus ENSLOCG00000008078 N 0.000
ZNF653 Myotis lucifugus ENSMLUG00000016337 I 0.000
ZNF653 Macaca mulatta ENSMMUG00000020617 I 0.000
ENSMMUP00000027145 Macaca fascicularis ENSMMUP00000027145 I 0.000
ENSMPUG00000005002 Mustela putorius furo ENSMPUG00000005002 I 0.000
Zfp653 Mus musculus ENSMUSG00000038895 I 0.000
ENSNLEG00000012591 Nomascus leucogenys ENSNLEG00000012591 I 0.000
ENSOANG00000012102 Ornithorhynchus anatinus ENSOANG00000012102 I 0.000
ZNF653 Otolemur garnettii ENSOGAG00000007074 I 0.000
ENSONIG00000008038 Oreochromis niloticus ENSONIG00000008038 I 0.000
znf653 Oryzias latipes ENSORLG00000016563 I 0.000
ENSPANG00000016446 Papio anubis ENSPANG00000016446 I 0.000
ENSPFOG00000003530 Poecilia formosa ENSPFOG00000003530 I 0.000
ENSPPYG00000009584 Pongo abelii ENSPPYG00000009584 I 0.000
ZNF653 Pan troglodytes ENSPTRG00000010507 I 0.000
ZNF653 Pteropus vampyrus ENSPVAG00000014895 I 0.000
Zfp653 Rattus norvegicus ENSRNOG00000014065 I 0.000
ZNF653 Sus scrofa ENSSSCG00000013616 I 0.000
ZNF653 Tursiops truncatus ENSTTRG00000001794 I 0.000
Myotis_brandtii_Znf653_10003855 Myotis brandtii Myotis_brandtii_Znf653_10003855 I 0.000
Ogr06398 Ophisaurus gracilis Ogr06398 I 0.000
Pvit_14576 Pogona vitticeps Pvit_14576 I 0.000