Thhalv10002247m.g (Eutrema salsugineum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Thhalv10002247m.g T229538_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10002247m Homeodomain 247 305

Links

Other Homeodomain family TFs
Other Eutrema salsugineum TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
evm.TU.supercontig_195.45 Carica papaya evm.TU.supercontig_195.45 N 0.728
orange1.1g040555m.g Citrus sinensis orange1.1g040555m.g N 0.718
Ciclev10033544m.g Citrus clementina Ciclev10033544m.g N 0.718
GSMUA_Achr4G12180_001 Musa acuminata GSMUA_Achr4G12180_001 N 0.716
OBART11G03800 Oryza barthii OBART11G03800 I 0.716
MTR_2g095050 Medicago truncatula MTR_2g095050 N 0.710
Cucsa.395170 Cucumis sativus Cucsa.395170 N 0.695
gene02674-v1.0-hybrid Fragaria vesca gene02674-v1.0-hybrid N 0.695
Cla023019 Citrullus lanatus Cla023019 N 0.695
GSMUA_Achr4G02680_001 Musa acuminata GSMUA_Achr4G02680_001 N 0.695
evm.TU.supercontig_78.15 Carica papaya evm.TU.supercontig_78.15 N 0.694
PDK_20s1614221g001 Phoenix dactylifera PDK_20s1614221g001 I 0.684
OLONG_016371 Oryza longistaminata OLONG_016371 I 0.684
PK17736.1 Cannabis sativa PK17736.1 N 0.684
LjSGA_061861.1 Lotus japonicus LjSGA_061861.1 I 0.662
GRMZM2G161435 Zea mays GRMZM2G161435 I 0.660
Sb04g008030 Sorghum bicolor Sb04g008030 I 0.660
POPTR_0002s03240 Populus trichocarpa POPTR_0002s03240 N 0.645
SapurV1A.0006s0130 Salix purpurea SapurV1A.0006s0130 N 0.645
OB12G13660 Oryza brachyantha OB12G13660 N 0.624