Thhalv10013990m.g (Eutrema salsugineum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Thhalv10013990m.g T229564_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10013990m Homeodomain 282 335

Links

Other Homeodomain family TFs
Other Eutrema salsugineum TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo9g171420 Brassica oleracea Bo9g171420 N 0.867
Bra008975 Brassica rapa Bra008975 N 0.867
OCP3 Arabidopsis thaliana AT5G11270 N 0.856
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.856
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.856
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.856
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.843
PK00680.1 Cannabis sativa PK00680.1 N 0.777
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N 0.738
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.726
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.725
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.716
GSMUA_Achr7G08370_001 Musa acuminata GSMUA_Achr7G08370_001 N 0.705
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.700
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.700
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.699
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.699
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.697
Cla021272 Citrullus lanatus Cla021272 N 0.695
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.695
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.690
Pm004594 Prunus mume Pm004594 N 0.690
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.689
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.682
TCM_038389 Theobroma cacao TCM_038389 N 0.682
MDP0000119866 Malus domestica MDP0000119866 N 0.681
MDP0000202143 Malus domestica MDP0000202143 N 0.670
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.661
29848.m004652 Ricinus communis 29848.m004652 N 0.661
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.652
Lus10002029.g Linum usitatissimum Lus10002029.g N 0.634
Traes_7AL_0FFE02C4C Triticum aestivum Traes_7AL_0FFE02C4C N 0.629
Traes_7DL_613F5240E Triticum aestivum Traes_7DL_613F5240E N 0.629
MLOC_45474 Hordeum vulgare MLOC_45474 N 0.629
Traes_7BL_E2E7AA383 Triticum aestivum Traes_7BL_E2E7AA383 N 0.629
OMERI06G20820 Oryza meridionalis OMERI06G20820 N 0.627
OPUNC06G18430 Oryza punctata OPUNC06G18430 N 0.627
OBART06G20210 Oryza barthii OBART06G20210 N 0.625
BGIOSGA023211 Oryza indica BGIOSGA023211 N 0.625
OB06G27850 Oryza brachyantha OB06G27850 N 0.625
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N 0.625
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N 0.625
OLONG_013537 Oryza longistaminata OLONG_013537 N 0.625
ONIVA06G23990 Oryza nivara ONIVA06G23990 N 0.625
OS06G0601000 Oryza sativa OS06G0601000 N 0.625
Lus10002899.g Linum usitatissimum Lus10002899.g N 0.622
MTR_3g107530 Medicago truncatula MTR_3g107530 N 0.621
BRADI1G58817 Brachypodium distachyon BRADI1G58817 N 0.615
SapurV1A.0043s0520 Salix purpurea SapurV1A.0043s0520 N 0.602