TF Information

AAG42360 *(Xenopus laevis)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	AAG42360	T229644_2.00	Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Six4 M00461_2.00	Mus musculus	NNKABMHNN	NNDKVTMNN	PBM Berger et al.(2008) Six4_2860	0.669	0.913
SIX4 M04939_2.00	Homo sapiens	NVYGATACVB	VBGTATCRBN	SELEX Yin et al.(2017) SIX4_eDBD_HT-SELEX	0.669	0.913
Six4 M09198_2.00	Mus musculus	DGDAABHNSASNNN	NNNSTSNDVTTHCH	Misc Kulakovskiy et al.(2013) SIX4_MOUSE.H11MO.0.C	0.669	0.913
SIX4 M10646_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SIX4_Q3	0.669	0.913
SIX4 M04940_2.00	Homo sapiens	NBGTAWCRHN	NDYGWTACVN	SELEX Yin et al.(2017) SIX4_eDBD_Methyl-HT-SELEX	0.669	0.913
Six4 M00563_2.00	Drosophila melanogaster	NNDANMHNN	NNDKNTHNN	PBM Busser et al.(2012a) Six4	0.668	0.761
Six4 M06530_2.00	Drosophila melanogaster	TGABAC	GTVTCA	B1H Mathelier et al.(2014) MA0204.1	0.668	0.761
Six4 M06334_2.00	Drosophila melanogaster	WDDTGABAC	GTVTCAHHW	B1H Zhu et al.(2011) Six4_Cell_FBgn0027364	0.668	0.761
Six4 M06335_2.00	Drosophila melanogaster	NTGAKACB	VGTMTCAN	B1H Zhu et al.(2011) Six4_SOLEXA_2_FBgn0027364	0.668	0.761
Six4 M06336_2.00	Drosophila melanogaster	NNNTGABA	TVTCANNN	B1H Zhu et al.(2011) Six4_SOLEXA_FBgn0027364	0.668	0.761
SIX5 M08208_2.00	Homo sapiens	GARWTGTAGT	ACTACAWYTC	ChIP-seq Contrino et al.(2012) Mv121	0.667	0.739
SIX5 M08209_2.00	Homo sapiens	GGAGTTGT	ACAACTCC	ChIP-seq Contrino et al.(2012) Mv123	0.667	0.739
SIX5 M10738_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SIX5_01	0.667	0.739
SIX5 M10739_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$SIX5_02	0.667	0.739
For this family, TFs with SR scores > 0.599* will likely have a similar motif*