AAI67543 (Xenopus tropicalis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 AAI67543 T229655_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Irx3
M00453_2.00
Mus musculus
NNDACAHNNN

NNNDTGTHNN
PBM
Berger et al.(2008)
Irx3_0920
0.867 0.965
Irx3
M00454_2.00
Mus musculus
NNDACWHN

NDWGTHNN
PBM
Berger et al.(2008)
Irx3_2226
0.867 0.965
Irx3
M03266_2.00
Mus musculus
WWTKTCATGTWR

YWACATGAMAWW
SELEX
Jolma et al.(2013)
Irx3_1
0.867 0.965
IRX1
M05283_2.00
Homo sapiens
DDCRHNNNNNNNNDYGHH

DDCRHNNNNNNNNDYGHH
SELEX
Yin et al.(2017)
IRX1_eDBD_HT-SELEX
0.867 0.965
IRX3
M05319_2.00
Homo sapiens
DACAHGNWWWWNCDTGTH

DACAHGNWWWWNCDTGTH
SELEX
Yin et al.(2017)
IRX3_eDBD_HT-SELEX
0.867 0.965
IRX1
M05284_2.00
Homo sapiens
NNCRHNNNNNNNNDYVHN

NDBRHNNNNNNNNDYGNN
SELEX
Yin et al.(2017)
IRX1_eDBD_Methyl-HT-SELEX
0.867 0.965
IRX3
M05320_2.00
Homo sapiens
DACRYRHNWWNDYKCGTW

WACGMRHNWWNDYRYGTH
SELEX
Yin et al.(2017)
IRX3_eDBD_Methyl-HT-SELEX
0.867 0.965
mirr
M06514_2.00
Drosophila melanogaster
WWACA

TGTWW
B1H
Mathelier et al.(2014)
MA0233.1
0.834 0.912
mirr
M06305_2.00
Drosophila melanogaster
NDNWWACA

TGTWWNHN
B1H
Zhu et al.(2011)
Mirr_Cell_FBgn0014343
0.834 0.912
mirr
M06306_2.00
Drosophila melanogaster
DDWACA

TGTWHH
B1H
Zhu et al.(2011)
Mirr_SOLEXA_FBgn0014343
0.834 0.912
SNAPOd2T00005194001
M02229_2.00
Oikopleura dioica
NNTACATGTDN

NHACATGTANN
PBM
Weirauch et al.(2014)
pTH5976
0.810 0.754
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI67543 Homeodomain 109 165

Links

Other Homeodomain family TFs
Other Xenopus tropicalis TFs

281 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GI16736 Drosophila mojavensis FBgn0139484 N 0.000
PHUM613040 Pediculus humanus PHUM613040 N 0.000
SMAR015279 Strigamia maritima SMAR015279 N 0.000
SPU_014249 Strongylocentrotus purpuratus SPU_014249 N 0.000
TC001448 Tribolium castaneum TC001448 N 0.000
tetur01g16040 Tetranychus urticae tetur01g16040 N 0.000
Aan_R007988 Calypte anna Aan_R007988 N 0.000
Afo_R000495 Aptenodytes forsteri Afo_R000495 N 0.000
Brh_R013374 Buceros rhinoceros Brh_R013374 N 0.000
Cflo_02462--XP_391937.2_APIME Camponotus floridanus Cflo_02462--XP_391937.2_APIME N 0.000
ENSP00000348460-D1 Bos grunniens ENSP00000348460-D1 N 0.000
ENSP00000348460 Macaca fascicularis ENSP00000348460 N 0.000
NV13641 Nasonia vitripennis NV13641 N 0.000
NEMVEDRAFT_v1g96877 Nematostella vectensis NEMVEDRAFT_v1g96877 N 0.000
GD25707 Drosophila simulans FBgn0196992 N 0.000
GJ12482 Drosophila virilis FBgn0199724 N 0.000
GK20151 Drosophila willistoni FBgn0222148 N 0.000
GE21022 Drosophila yakuba FBgn0238304 N 0.000
trh Drosophila melanogaster FBgn0262139 N 0.000
GB52114 Apis mellifera GB52114 N 0.000
HelroG63031 Helobdella robusta HelroG63031 N 0.000
ISCW018625 Ixodes scapularis ISCW018625 N 0.000
L798_01241 Zootermopsis nevadensis L798_01241 N 0.000
LotgiG127403 Lottia gigantea LotgiG127403 N 0.000
MCINX015160 Melitaea cinxia MCINX015160 N 0.000
Gfo_R012966 Geospiza fortis Gfo_R012966 N 0.000
Hsal_10736--XP_391937.2_APIME Harpegnathos saltator Hsal_10736--XP_391937.2_APIME N 0.000
Pvit_04747 Pogona vitticeps Pvit_04747 N 0.000
ADIR001051 Anopheles dirus ADIR001051 N 0.000
AEPI007278 Anopheles epiroticus AEPI007278 N 0.000
AFAF017713 Anopheles farauti AFAF017713 N 0.000
AMAM000698 Anopheles maculatus AMAM000698 N 0.000
AMEC022213 Anopheles melas AMEC022213 N 0.000
AMEM001368 Anopheles merus AMEM001368 N 0.000
AMIN002121 Anopheles minimus AMIN002121 N 0.000
AQUA005712 Anopheles quadriannulatus AQUA005712 N 0.000
ASIS013948 Anopheles sinensis ASIS013948 N 0.000
ASTEI06194 Anopheles stephensi ASTEI06194 N 0.000
BGLB001139 Biomphalaria glabrata BGLB001139 N 0.000
ACUA021406 Anopheles culicifacies ACUA021406 N 0.000
ACOM029080 Anopheles coluzzii ACOM029080 N 0.000
Tal_R006980 Tyto alba Tal_R006980 N 0.000
gw.84.113.1 Branchiostoma floridae gw.84.113.1 N 0.000
Ocbimv22029779m.g Octopus bimaculoides Ocbimv22029779m.g N 0.000
Sakowv30006415m.g Saccoglossus kowalevskii Sakowv30006415m.g N 0.000
CLEC007310 Cimex lectularius CLEC007310 N 0.000
LCUP010821 Lucilia cuprina LCUP010821 N 0.000
LDEC011477 Leptinotarsa decemlineata LDEC011477 N 0.000
npas3 Xenopus tropicalis XB-GENE-999791 N 0.000
AALB007750 Anopheles albimanus AALB007750 N 0.000
AARA001122 Anopheles arabiensis AARA001122 N 0.000
AATE003730 Anopheles atroparvus AATE003730 N 0.000
MDOA009035 Musca domestica MDOA009035 N 0.000
CpipJ_CPIJ006378 Culex pipiens CpipJ_CPIJ006378 N 0.000
NPAS3 Choloepus hoffmanni ENSCHOG00000013756 N 0.000
NPAS3 Callithrix jacchus ENSCJAG00000005437 N 0.000
NPAS3 Cavia porcellus ENSCPOG00000006976 N 0.000
Npas3 Dipodomys ordii ENSDORG00000000860 N 0.000
ENSECAG00000004630 Equus caballus ENSECAG00000004630 N 0.000
NPAS3 Erinaceus europaeus ENSEEUG00000006528 N 0.000
NPAS3 Echinops telfairi ENSETEG00000016603 N 0.000
NPAS3 Homo sapiens ENSG00000151322 N 0.000
NPAS3 Gallus gallus ENSGALG00000029022 N 0.000
NPAS3 Gorilla gorilla ENSGGOG00000022941 N 0.000
ENSLACG00000001145 Latimeria chalumnae ENSLACG00000001145 N 0.000
ENSAPLG00000000714 Anas platyrhynchos ENSAPLG00000000714 N 0.000
ENSAMEG00000018716 Ailuropoda melanoleuca ENSAMEG00000018716 N 0.000
CpipJ_CPIJ006379 Culex pipiens CpipJ_CPIJ006379 N 0.000
AAEL002343 Aedes aegypti AAEL002343 N 0.000
AAEL014740 Aedes aegypti AAEL014740 N 0.000
ACEP14936 Atta cephalotes ACEP14936 N 0.000
ACYPI001635 Acyrthosiphon pisum ACYPI001635 N 0.000
ADAC003908 Anopheles darlingi ADAC003908 N 0.000
AGAP000056 Anopheles gambiae AGAP000056 N 0.000
CGI_10014877 Crassostrea gigas CGI_10014877 N 0.000
CPIJ006378 Culex quinquefasciatus CPIJ006378 N 0.000
CPIJ006379 Culex quinquefasciatus CPIJ006379 N 0.000
DAPPUDRAFT_59022 Daphnia pulex DAPPUDRAFT_59022 N 0.000
NPAS3 Loxodonta africana ENSLAFG00000007169 N 0.000
ENSMEUG00000012966 Macropus eugenii ENSMEUG00000012966 N 0.000
ENSMGAG00000016559 Meleagris gallopavo ENSMGAG00000016559 N 0.000
ENSSSCG00000024473 Sus scrofa ENSSSCG00000024473 N 0.000
ENSSTOG00000014736 Ictidomys tridecemlineatus ENSSTOG00000014736 N 0.000
NPAS3 Tupaia belangeri ENSTBEG00000016041 N 0.000
ENSTGUG00000011911 Taeniopygia guttata ENSTGUG00000011911 N 0.000
NPAS3 Tursiops truncatus ENSTTRG00000003266 N 0.000
NPAS3 Vicugna pacos ENSVPAG00000001108 N 0.000
trh Drosophila sechellia FBgn0025046 N 0.000
GA19928 Drosophila pseudoobscura FBgn0079924 N 0.000
GF24890 Drosophila ananassae FBgn0101882 N 0.000
GG14662 Drosophila erecta FBgn0106918 N 0.000
GH15456 Drosophila grimshawi FBgn0122928 N 0.000
ENSSHAG00000011475 Sarcophilus harrisii ENSSHAG00000011475 N 0.000
NPAS3 Sorex araneus ENSSARG00000003164 N 0.000
NPAS3 Macaca mulatta ENSMMUG00000014839 N 0.000
ENSMODG00000024103 Monodelphis domestica ENSMODG00000024103 N 0.000
ENSMPUG00000001046 Mustela putorius furo ENSMPUG00000001046 N 0.000
Npas3 Mus musculus ENSMUSG00000021010 N 0.000
ENSNLEG00000003239 Nomascus leucogenys ENSNLEG00000003239 N 0.000
ENSOANG00000014043 Ornithorhynchus anatinus ENSOANG00000014043 N 0.000
NPAS3 Otolemur garnettii ENSOGAG00000014886 N 0.000
NPAS3 Ochotona princeps ENSOPRG00000008184 N 0.000
NPAS3 Procavia capensis ENSPCAG00000007391 N 0.000
ENSPSIG00000017052 Pelodiscus sinensis ENSPSIG00000017052 N 0.000
NPAS3 Pan troglodytes ENSPTRG00000006249 N 0.000
GH23748 Drosophila grimshawi FBgn0131205 N 0.000