CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EFA86584.1
(
Polysphondylium pallidum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
EFA86584.1
T229815_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CAD26261
M02055_2.00
Encephalitozoon cuniculi
NNYAATWWA
TWWATTRNN
PBM
Weirauch et al.(2014)
pTH6363
0.728
0.561
NEMVEDRAFT_v1g105595
M02143_2.00
Nematostella vectensis
NTWATWRN
NYWATWAN
PBM
Weirauch et al.(2014)
pTH5503
0.659
0.474
hbx10
M02074_2.00
Dictyostelium discoideum
NYAATWWN
NWWATTRN
PBM
Weirauch et al.(2014)
pTH5547
0.620
0.596
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFA86584.1
Homeodomain
136
192
KKKRKRTSPDQLKILERIFLAHQHPSLNLRNQLAIELGMTPRSVQIWFQNRRAKARN
Links
Other
Homeodomain
family TFs
Other
Polysphondylium pallidum
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy