|
HHAL000409-PA
(Halyomorpha halys)
Homeodomain
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00046 (Homeobox) |
IPR001356 |
HHAL000409-PA |
T229818_2.00 |
Misc (2018-Jan-19) |
NCBI Gene Info:This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
Otx2
M00418_2.00 |
Mus musculus |
NTAAKMBN |
NVKMTTAN |
PBM
Berger et al.(2008)
Otx2_3441
|
0.867
|
1.000
|
OTX2
M03197_2.00 |
Homo sapiens |
NHTAAKCGGATTANN |
NNTAATCCGMTTADN |
SELEX
Jolma et al.(2013)
OTX2_1
|
0.867
|
1.000
|
OTX2
M03198_2.00 |
Homo sapiens |
HTAATCCB |
VGGATTAD |
SELEX
Jolma et al.(2013)
OTX2_2
|
0.867
|
1.000
|
OTX2
M05251_2.00 |
Homo sapiens |
NTAATCCN |
NGGATTAN |
SELEX
Yin et al.(2017)
OTX2_FL_HT-SELEX
|
0.867
|
1.000
|
OTX2
M09153_2.00 |
Homo sapiens |
BYTAATCCYYN |
NRRGGATTARV |
Misc
Kulakovskiy et al.(2013)
OTX2_HUMAN.H11MO.0.A
|
0.867
|
1.000
|
Otx2
M09183_2.00 |
Mus musculus |
HTAATCCYNYNN |
NNRNRGGATTAD |
Misc
Kulakovskiy et al.(2013)
OTX2_MOUSE.H11MO.0.A
|
0.867
|
1.000
|
Otx2
M09569_2.00 |
Mus musculus |
NHTAATCCHB |
VDGGATTADN |
Misc
Heinz et al.(2010)
EpiLC-Otx2_GSE56098
|
0.867
|
1.000
|
OTX2
M10727_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$OTX2_Q3_01
|
0.867
|
1.000
|
OTX2
M10728_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$OTX2_Q3
|
0.867
|
1.000
|
OTX2
M05252_2.00 |
Homo sapiens |
NTAATCCN |
NGGATTAN |
SELEX
Yin et al.(2017)
OTX2_FL_Methyl-HT-SELEX
|
0.867
|
1.000
|
Otx1
M00396_2.00 |
Mus musculus |
NTAAKCYN |
NRGMTTAN |
PBM
Berger et al.(2008)
Otx1_2325
|
0.867
|
0.982
|
OTX1
M03116_2.00 |
Homo sapiens |
NNTAAKCGGATTANN |
NNTAATCCGMTTANN |
SELEX
Jolma et al.(2013)
OTX1_1
|
0.867
|
0.982
|
OTX1
M03117_2.00 |
Homo sapiens |
NTAATCSB |
VSGATTAN |
SELEX
Jolma et al.(2013)
OTX1_2
|
0.867
|
0.982
|
Otx1
M03249_2.00 |
Mus musculus |
NNTAAKCGGATTANN |
NNTAATCCGMTTANN |
SELEX
Jolma et al.(2013)
Otx1_1
|
0.867
|
0.982
|
Otx1
M03250_2.00 |
Mus musculus |
NTAATCCN |
NGGATTAN |
SELEX
Jolma et al.(2013)
Otx1_2
|
0.867
|
0.982
|
OTX1
M05022_2.00 |
Homo sapiens |
NTAATCCN |
NGGATTAN |
SELEX
Yin et al.(2017)
OTX1_eDBD_HT-SELEX
|
0.867
|
0.982
|
OTX1
M05024_2.00 |
Homo sapiens |
NTAATCCNNN |
NNNGGATTAN |
SELEX
Yin et al.(2017)
OTX1_FL_HT-SELEX
|
0.867
|
0.982
|
OTX1
M10673_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$OTX1_Q5
|
0.867
|
0.982
|
OTX1
M05023_2.00 |
Homo sapiens |
NTAATCCN |
NGGATTAN |
SELEX
Yin et al.(2017)
OTX1_eDBD_Methyl-HT-SELEX
|
0.867
|
0.982
|
OTX1
M05025_2.00 |
Homo sapiens |
HTAATCCNHN |
NDNGGATTAD |
SELEX
Yin et al.(2017)
OTX1_FL_Methyl-HT-SELEX
|
0.867
|
0.982
|
oc
M03808_2.00 |
Drosophila melanogaster |
HTAATCCB |
VGGATTAD |
SELEX
Nitta et al.(2015)
oc_1
|
0.866
|
0.982
|
oc
M06502_2.00 |
Drosophila melanogaster |
TAATCC |
GGATTA |
B1H
Mathelier et al.(2014)
MA0234.1
|
0.866
|
0.982
|
oc
M06282_2.00 |
Drosophila melanogaster |
WTAATCC |
GGATTAW |
B1H
Zhu et al.(2011)
Oc_Cell_FBgn0004102
|
0.866
|
0.982
|
oc
M06283_2.00 |
Drosophila melanogaster |
NTAATCCB |
VGGATTAN |
B1H
Zhu et al.(2011)
Oc_SOLEXA_FBgn0004102
|
0.866
|
0.982
|
oc
M09681_2.00 |
Drosophila melanogaster |
HTAATCCN |
NGGATTAD |
Misc
Kulakovskiy et al.(2009)
oc
|
0.866
|
0.982
|
CRX
M00275_2.00 |
Homo sapiens |
NMTAATCCSN |
NSGGATTAKN |
PBM
Barrera et al.(2016)
CRX_V66I
|
0.860
|
0.895
|
CRX
M00274_2.00 |
Homo sapiens |
NMTAATCCSN |
NSGGATTAKN |
PBM
Barrera et al.(2016)
CRX_REF
|
0.851
|
0.877
|
Crx
M00489_2.00 |
Mus musculus |
NWAAKMBN |
NVKMTTWN |
PBM
Berger et al.(2008)
Crx_3485
|
0.851
|
0.877
|
CRX
M04949_2.00 |
Homo sapiens |
NTAATCCN |
NGGATTAN |
SELEX
Yin et al.(2017)
CRX_FL_HT-SELEX
|
0.851
|
0.877
|
Crx
M08139_2.00 |
Mus musculus |
YTAATCCYCYY |
RRGRGGATTAR |
ChIP-seq
Mathelier et al.(2014)
MA0467.1
|
0.851
|
0.877
|
CRX
M09132_2.00 |
Homo sapiens |
BYTAATCCBHYYN |
NRRDVGGATTARV |
Misc
Kulakovskiy et al.(2013)
CRX_HUMAN.H11MO.0.B
|
0.851
|
0.877
|
Crx
M09208_2.00 |
Mus musculus |
BYTAATCCBHYYN |
NRRDVGGATTARV |
Misc
Kulakovskiy et al.(2013)
CRX_MOUSE.H11MO.0.A
|
0.851
|
0.877
|
Crx
M09577_2.00 |
Mus musculus |
NYTAATCC |
GGATTARN |
Misc
Heinz et al.(2010)
Retina-Crx_GSE20012
|
0.851
|
0.877
|
CRX
M10647_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$CRX_Q4_01
|
0.851
|
0.877
|
CRX
M10648_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$CRX_Q4_02
|
0.851
|
0.877
|
CRX
M04950_2.00 |
Homo sapiens |
HTAATCCN |
NGGATTAD |
SELEX
Yin et al.(2017)
CRX_FL_Methyl-HT-SELEX
|
0.851
|
0.877
|
CRX
M00273_2.00 |
Homo sapiens |
NNYTAATCCVN |
NBGGATTARNN |
PBM
Barrera et al.(2016)
CRX_R90W
|
0.840
|
0.860
|
CRX
M00270_2.00 |
Homo sapiens |
NWDAKNN |
NNMTHWN |
PBM
Barrera et al.(2016)
CRX_E80A
|
0.830
|
0.860
|
CRX
M00271_2.00 |
Homo sapiens |
NHDAKNN |
NNMTHDN |
PBM
Barrera et al.(2016)
CRX_R41Q
|
0.818
|
0.860
|
CRX
M00272_2.00 |
Homo sapiens |
NNHNATNN |
NNATNDNN |
PBM
Barrera et al.(2016)
CRX_R41W
|
0.818
|
0.860
|
ceh-37
M00674_2.00 |
Caenorhabditis elegans |
HTAATCYN |
NRGATTAD |
PBM
Narasimhan et al.(2015)
pTH10716
|
0.794
|
0.667
|
Dmbx1
M00441_2.00 |
Mus musculus |
NTAATCYNN |
NNRGATTAN |
PBM
Berger et al.(2008)
Dmbx1_2277
|
0.764
|
0.649
|
DMBX1
M03236_2.00 |
Homo sapiens |
NHTAATCCBN |
NVGGATTADN |
SELEX
Jolma et al.(2013)
DMBX1_1
|
0.764
|
0.649
|
DMBX1
M05383_2.00 |
Homo sapiens |
NTAATCSN |
NSGATTAN |
SELEX
Yin et al.(2017)
DMBX1_eDBD_HT-SELEX
|
0.764
|
0.649
|
DMBX1
M05384_2.00 |
Homo sapiens |
HTAATCCN |
NGGATTAD |
SELEX
Yin et al.(2017)
DMBX1_eDBD_Methyl-HT-SELEX
|
0.764
|
0.649
|
ceh-53
M00679_2.00 |
Caenorhabditis elegans |
HTAATCYN |
NRGATTAD |
PBM
Narasimhan et al.(2015)
pTH10699
|
0.760
|
0.526
|
ceh-36
M00673_2.00 |
Caenorhabditis elegans |
NWAATCYN |
NRGATTWN |
PBM
Narasimhan et al.(2015)
pTH10730
|
0.759
|
0.649
|
HBX4_ECHGR
M02195_2.00 |
Echinococcus granulosus |
NHTAATCYNN |
NNRGATTADN |
PBM
Weirauch et al.(2014)
pTH6301
|
0.750
|
0.561
|
NEMVEDRAFT_v1g113057
M02144_2.00 |
Nematostella vectensis |
NYTAATCCBN |
NVGGATTARN |
PBM
Weirauch et al.(2014)
pTH6135
|
0.750
|
0.544
|
Gsc
M02120_2.00 |
Drosophila melanogaster |
NTAATCYN |
NRGATTAN |
PBM
Weirauch et al.(2014)
pTH5511
|
0.741
|
0.632
|
Gsc
M03817_2.00 |
Drosophila melanogaster |
TAATCCB |
VGGATTA |
SELEX
Nitta et al.(2015)
Gsc_1
|
0.741
|
0.632
|
Gsc
M03818_2.00 |
Drosophila melanogaster |
TAATCGGATTA |
TAATCCGATTA |
SELEX
Nitta et al.(2015)
Gsc_2
|
0.741
|
0.632
|
Gsc
M03819_2.00 |
Drosophila melanogaster |
TAATCYNHTAATCBN |
NVGATTADNRGATTA |
SELEX
Nitta et al.(2015)
Gsc_3
|
0.741
|
0.632
|
Gsc
M03820_2.00 |
Drosophila melanogaster |
TAATCGGATTA |
TAATCCGATTA |
SELEX
Nitta et al.(2015)
Gsc_4
|
0.741
|
0.632
|
Gsc
M03821_2.00 |
Drosophila melanogaster |
TAATCYNWTWATCYB |
VRGATWAWNRGATTA |
SELEX
Nitta et al.(2015)
Gsc_5
|
0.741
|
0.632
|
Gsc
M05873_2.00 |
Drosophila melanogaster |
TAATCSNHTWA |
TWADNSGATTA |
SMiLE-seq
Isakova et al.(2017)
Gsc
|
0.741
|
0.632
|
Gsc
M06509_2.00 |
Drosophila melanogaster |
TAATCY |
RGATTA |
B1H
Mathelier et al.(2014)
MA0190.1
|
0.741
|
0.632
|
Gsc
M06297_2.00 |
Drosophila melanogaster |
VNTAATCY |
RGATTANB |
B1H
Zhu et al.(2011)
Gsc_Cell_FBgn0010323
|
0.741
|
0.632
|
Gsc
M06298_2.00 |
Drosophila melanogaster |
NTAATCY |
RGATTAN |
B1H
Zhu et al.(2011)
Gsc_SOLEXA_FBgn0010323
|
0.741
|
0.632
|
Gsc
M00411_2.00 |
Mus musculus |
NNTAATYBN |
NVRATTANN |
PBM
Berger et al.(2008)
Gsc_2327
|
0.736
|
0.579
|
GSC
M03146_2.00 |
Homo sapiens |
NHTAATCCNH |
DNGGATTADN |
SELEX
Jolma et al.(2013)
GSC_1
|
0.736
|
0.579
|
GSC
M05134_2.00 |
Homo sapiens |
NTAATCCB |
VGGATTAN |
SELEX
Yin et al.(2017)
GSC_eDBD_HT-SELEX
|
0.736
|
0.579
|
GSC
M05136_2.00 |
Homo sapiens |
HTAATCCN |
NGGATTAD |
SELEX
Yin et al.(2017)
GSC_FL_HT-SELEX
|
0.736
|
0.579
|
GSC
M05135_2.00 |
Homo sapiens |
HTAATCCB |
VGGATTAD |
SELEX
Yin et al.(2017)
GSC_eDBD_Methyl-HT-SELEX
|
0.736
|
0.579
|
GSC
M05137_2.00 |
Homo sapiens |
HTAATCCN |
NGGATTAD |
SELEX
Yin et al.(2017)
GSC_FL_Methyl-HT-SELEX
|
0.736
|
0.579
|
CBG01820
M01241_2.00 |
Caenorhabditis briggsae |
NTAATCCN |
NGGATTAN |
PBM
Lambert et al.(2019)
pTH11454
|
0.736
|
0.614
|
Pitx1
M00415_2.00 |
Mus musculus |
NTAATCYNN |
NNRGATTAN |
PBM
Berger et al.(2008)
Pitx1_2312
|
0.731
|
0.632
|
PITX1
M03082_2.00 |
Homo sapiens |
NHTAATCCN |
NGGATTADN |
SELEX
Jolma et al.(2013)
PITX1_1
|
0.731
|
0.632
|
PITX1
M03083_2.00 |
Homo sapiens |
NHTAATCCN |
NGGATTADN |
SELEX
Jolma et al.(2013)
PITX1_2
|
0.731
|
0.632
|
PITX1
M03084_2.00 |
Homo sapiens |
HTAATCCN |
NGGATTAD |
SELEX
Jolma et al.(2013)
PITX1_3
|
0.731
|
0.632
|
PITX1
M04928_2.00 |
Homo sapiens |
NTAATCCN |
NGGATTAN |
SELEX
Yin et al.(2017)
PITX1_eDBD_HT-SELEX
|
0.731
|
0.632
|
PITX1
M04930_2.00 |
Homo sapiens |
NTAATCCN |
NGGATTAN |
SELEX
Yin et al.(2017)
PITX1_FL_HT-SELEX
|
0.731
|
0.632
|
Pitx1
M09182_2.00 |
Mus musculus |
NYWAAKCCYH |
DRGGMTTWRN |
Misc
Kulakovskiy et al.(2013)
PITX1_MOUSE.H11MO.0.C
|
0.731
|
0.632
|
PITX1
M10640_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$PITX1_Q4
|
0.731
|
0.632
|
PITX1
M10641_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$PITX1_Q6
|
0.731
|
0.632
|
PITX1
M04929_2.00 |
Homo sapiens |
NTAAKCCN |
NGGMTTAN |
SELEX
Yin et al.(2017)
PITX1_eDBD_Methyl-HT-SELEX
|
0.731
|
0.632
|
PITX1
M04931_2.00 |
Homo sapiens |
HTAATCCN |
NGGATTAD |
SELEX
Yin et al.(2017)
PITX1_FL_Methyl-HT-SELEX
|
0.731
|
0.632
|
PITX2
M00313_2.00 |
Homo sapiens |
NWAAKHYN |
NRDMTTWN |
PBM
Barrera et al.(2016)
PITX2_REF
|
0.731
|
0.614
|
Pitx3
M00428_2.00 |
Mus musculus |
NTAAKCYN |
NRGMTTAN |
PBM
Berger et al.(2008)
Pitx3_3497
|
0.731
|
0.614
|
Pitx2
M00440_2.00 |
Mus musculus |
NTAATCCN |
NGGATTAN |
PBM
Berger et al.(2008)
Pitx2_2274
|
0.731
|
0.614
|
PITX3
M03111_2.00 |
Homo sapiens |
NHTAATCCN |
NGGATTADN |
SELEX
Jolma et al.(2013)
PITX3_1
|
0.731
|
0.614
|
PITX2
M05229_2.00 |
Homo sapiens |
NTAAKCCN |
NGGMTTAN |
SELEX
Yin et al.(2017)
PITX2_eDBD_HT-SELEX
|
0.731
|
0.614
|
PITX2
M05231_2.00 |
Homo sapiens |
NTAATCCN |
NGGATTAN |
SELEX
Yin et al.(2017)
PITX2_FL_HT-SELEX
|
0.731
|
0.614
|
PITX3
M04997_2.00 |
Homo sapiens |
NTAATCCN |
NGGATTAN |
SELEX
Yin et al.(2017)
PITX3_eDBD_HT-SELEX
|
0.731
|
0.614
|
PITX2
M10720_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$PITX2_Q2
|
0.731
|
0.614
|
PITX2
M10721_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$PITX2_Q4
|
0.731
|
0.614
|
PITX2
M10722_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$PITX2_Q6
|
0.731
|
0.614
|
PITX3
M10660_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$PITX3_Q2
|
0.731
|
0.614
|
PITX3
M10661_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$PITX3_Q3_01
|
0.731
|
0.614
|
PITX3
M10662_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$PITX3_Q3
|
0.731
|
0.614
|
PITX2
M00312_2.00 |
Homo sapiens |
NNNTATWAATTNN |
NNAATTWATANNN |
PBM
Barrera et al.(2016)
PITX2_R130W
|
0.731
|
0.614
|
PITX2
M00314_2.00 |
Homo sapiens |
NTAATMYN |
NRKATTAN |
PBM
Barrera et al.(2016)
PITX2_T114P
|
0.731
|
0.614
|
PITX2
M05230_2.00 |
Homo sapiens |
HTAATCCN |
NGGATTAD |
SELEX
Yin et al.(2017)
PITX2_eDBD_Methyl-HT-SELEX
|
0.731
|
0.614
|
PITX2
M05232_2.00 |
Homo sapiens |
YTAATCCY |
RGGATTAR |
SELEX
Yin et al.(2017)
PITX2_FL_Methyl-HT-SELEX
|
0.731
|
0.614
|
PITX3
M04998_2.00 |
Homo sapiens |
NTAATCCN |
NGGATTAN |
SELEX
Yin et al.(2017)
PITX3_eDBD_Methyl-HT-SELEX
|
0.731
|
0.614
|
Ptx1
M02123_2.00 |
Drosophila melanogaster |
NTAATCYNN |
NNRGATTAN |
PBM
Weirauch et al.(2014)
pTH5644
|
0.731
|
0.596
|
Ptx1
M00562_2.00 |
Drosophila melanogaster |
NYTAATCCBN |
NVGGATTARN |
PBM
Busser et al.(2012a)
Ptx1
|
0.731
|
0.596
|
Ptx1
M03842_2.00 |
Drosophila melanogaster |
NTAATCCN |
NGGATTAN |
SELEX
Nitta et al.(2015)
Ptx1_1
|
0.731
|
0.596
|
Ptx1
M03843_2.00 |
Drosophila melanogaster |
NTAATCCN |
NGGATTAN |
SELEX
Nitta et al.(2015)
Ptx1_2
|
0.731
|
0.596
|
Ptx1
M03844_2.00 |
Drosophila melanogaster |
NCGHTAATCCN |
NGGATTADCGN |
SELEX
Nitta et al.(2015)
Ptx1_3
|
0.731
|
0.596
|
Ptx1
M06521_2.00 |
Drosophila melanogaster |
YTAATCC |
GGATTAR |
B1H
Mathelier et al.(2014)
MA0201.1
|
0.731
|
0.596
|
Ptx1
M06319_2.00 |
Drosophila melanogaster |
YTAATCC |
GGATTAR |
B1H
Zhu et al.(2011)
Ptx1_Cell_FBgn0020912
|
0.731
|
0.596
|
Ptx1
M06320_2.00 |
Drosophila melanogaster |
NYTAATCC |
GGATTARN |
B1H
Zhu et al.(2011)
Ptx1_SOLEXA_FBgn0020912
|
0.731
|
0.596
|
PITX2
M00310_2.00 |
Homo sapiens |
HTAATCYN |
NRGATTAD |
PBM
Barrera et al.(2016)
PITX2_L100Q
|
0.731
|
0.596
|
GSC2
M03080_2.00 |
Homo sapiens |
NHTAATCCBH |
DVGGATTADN |
SELEX
Jolma et al.(2013)
GSC2_1
|
0.731
|
0.579
|
GSC2
M04920_2.00 |
Homo sapiens |
NTAATNNN |
NNNATTAN |
SELEX
Yin et al.(2017)
GSC2_eDBD_HT-SELEX
|
0.731
|
0.579
|
GSC2
M04921_2.00 |
Homo sapiens |
NTAATCYN |
NRGATTAN |
SELEX
Yin et al.(2017)
GSC2_eDBD_Methyl-HT-SELEX
|
0.731
|
0.579
|
PITX2
M00311_2.00 |
Homo sapiens |
TTAATCCY |
RGGATTAA |
PBM
Barrera et al.(2016)
PITX2_R108H
|
0.726
|
0.596
|
gsc
M09584_2.00 |
Xenopus tropicalis |
NTAATCYN |
NRGATTAN |
Misc
Heinz et al.(2010)
FrogEmbryos-GSC_DRA000576
|
0.724
|
0.561
|
DPRX
M03237_2.00 |
Homo sapiens |
NHTAATCYNN |
NNRGATTADN |
SELEX
Jolma et al.(2013)
DPRX_1
|
0.685
|
0.439
|
DPRX
M03238_2.00 |
Homo sapiens |
NRGMTAATCYN |
NRGATTAKCYN |
SELEX
Jolma et al.(2013)
DPRX_2
|
0.685
|
0.439
|
DPRX
M05388_2.00 |
Homo sapiens |
VGMTAATCYN |
NRGATTAKCB |
SELEX
Yin et al.(2017)
DPRX_eDBD_HT-SELEX
|
0.685
|
0.439
|
DPRX
M05389_2.00 |
Homo sapiens |
AGATMATCYN |
NRGATKATCT |
SELEX
Yin et al.(2017)
DPRX_eDBD_Methyl-HT-SELEX
|
0.685
|
0.439
|
dve
M02122_2.00 |
Drosophila melanogaster |
NTAATCCV |
BGGATTAN |
PBM
Weirauch et al.(2014)
pTH6218
|
0.632
|
0.351
|
AGAP006642
M02035_2.00 |
Anopheles gambiae |
NHTAATCY |
RGATTADN |
PBM
Weirauch et al.(2014)
pTH6201
|
0.631
|
0.333
|
Obox6
M00490_2.00 |
Mus musculus |
NTAATCYNN |
NNRGATTAN |
PBM
Berger et al.(2008)
Obox6_3440
|
0.616
|
0.368
|
For this family, TFs with SR scores > 0.599 will likely have a similar motif |