CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HHAL003319-PA
(
Halyomorpha halys
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
HHAL003319-PA
T229836_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
achi
M03860_2.00
Drosophila melanogaster
TGACAD
HTGTCA
SELEX
Nitta et al.(2015)
achi_1
0.629
0.745
achi
M03861_2.00
Drosophila melanogaster
TGACAGMTGTCA
TGACAKCTGTCA
SELEX
Nitta et al.(2015)
achi_2
0.629
0.745
achi
M03862_2.00
Drosophila melanogaster
TGACAGNNNNNNYGTCA
TGACRNNNNNNCTGTCA
SELEX
Nitta et al.(2015)
achi_3
0.629
0.745
vis
M03859_2.00
Drosophila melanogaster
TGACAS
STGTCA
SELEX
Nitta et al.(2015)
vis_1
0.629
0.745
vis
M06534_2.00
Drosophila melanogaster
TGACAB
BTGTCA
B1H
Mathelier et al.(2014)
MA0252.1
0.629
0.745
achi
M06535_2.00
Drosophila melanogaster
TGACAG
CTGTCA
B1H
Mathelier et al.(2014)
MA0207.1
0.629
0.745
achi
M06345_2.00
Drosophila melanogaster
TGTCADW
WHTGACA
B1H
Zhu et al.(2011)
Achi_Cell_FBgn0033749
0.629
0.745
achi
M06346_2.00
Drosophila melanogaster
HTGACA
TGTCAD
B1H
Zhu et al.(2011)
Achi_SOLEXA_FBgn0033749
0.629
0.745
vis
M06343_2.00
Drosophila melanogaster
TGTCA
TGACA
B1H
Zhu et al.(2011)
Vis_Cell_FBgn0033748
0.629
0.745
vis
M06344_2.00
Drosophila melanogaster
TGTCAD
HTGACA
B1H
Zhu et al.(2011)
Vis_SOLEXA_FBgn0033748
0.629
0.745
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HHAL003319-PA
Homeodomain
47
104
KKRRMNLPTESVRILKRWLFDHRHNAYPNDFEKSSLSQEANLTISQVSNWFINARRRI
Links
Other
Homeodomain
family TFs
Other
Halyomorpha halys
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy