CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU03070
(
Neurospora crassa
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
NCU03070
T230060_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03070
M02222_2.00
Neurospora crassa
NNYCAATAWW
WWTATTGRNN
PBM
Weirauch et al.(2014)
pTH5859
(Direct)
(Direct)
NCU03070
M02223_2.00
Neurospora crassa
NNHAYNDNN
NNHNRTDNN
PBM
Weirauch et al.(2014)
pTH9699
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01217
M02056_2.00
Aspergillus nidulans
NWTATHDNNN
NNNHDATAWN
PBM
Weirauch et al.(2014)
pTH5818
0.616
0.536
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02222_2.00
Homeodomain
1
55
PKPRLAKDEVELLEREFAKNPKPNTSLKRELAEQMGVEVPRINNWFQNRRAKEKQ
M02223_2.00
Homeodomain
52
107
EPKPRLAKDEVELLEREFAKNPKPNTSLKRELAEQMGVEVPRINNWFQNRRAKEKQ
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU03070.1
Homeodomain
66
121
EPKPRLAKDEVELLEREFAKNPKPNTSLKRELAEQMGVEVPRINNWFQNRRAKEKQ
NCU03070.2
Homeodomain
66
121
EPKPRLAKDEVELLEREFAKNPKPNTSLKRELAEQMGVEVPRINNWFQNRRAKEKQ
Links
Other
Homeodomain
family TFs
Other
Neurospora crassa
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy