kal-1 (Neurospora crassa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 NCU03593 T230062_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
kal-1
M02225_2.00
Neurospora crassa
NNNNRHNN

NNDYNNNN
PBM
Weirauch et al.(2014)
pTH8911
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
hbx10
M02074_2.00
Dictyostelium discoideum
NYAATWWN

NWWATTRN
PBM
Weirauch et al.(2014)
pTH5547
0.678 0.456
phx1
M02173_2.00
Schizosaccharomyces pombe
NWTTAATTANN

NNTAATTAAWN
PBM
Weirauch et al.(2014)
pTH6047
0.614 0.561
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02225_2.00 Homeodomain 52 108

DNA Binding Domains

Protein ID Domain From To Sequence
NCU03593 Homeodomain 78 134

Links

Other Homeodomain family TFs
Other Neurospora crassa TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29739.m003565 Ricinus communis 29739.m003565 I 0.000
29968.m000635 Ricinus communis 29968.m000635 I 0.000
AMSG_01638 Thecamonas trahens AMSG_01638 I 0.000
AMSG_03636 Thecamonas trahens AMSG_03636 I 0.000
Aquca_020_00446 Aquilegia coerulea Aquca_020_00446 I 0.000
AT-HSFA4A Arabidopsis lyrata fgenesh2_kg.7__2405__AT4G18880.1 I 0.000
AT-HSFA8 Vitis vinifera VIT_01s0011g05970 I 0.000
BGIOSGA006438 Oryza indica BGIOSGA006438 I 0.000
BN946_scf185014.g98 Trametes cinnabarina BN946_scf185014.g98 I 0.000
Bo01835s010 Brassica oleracea Bo01835s010 N 0.000
Bo1g007320 Brassica oleracea Bo1g007320 I 0.000
Bo1g020010 Brassica oleracea Bo1g020010 I 0.000
Bo1g021700 Brassica oleracea Bo1g021700 I 0.000
Bo2g056350 Brassica oleracea Bo2g056350 I 0.000
Bo2g165540 Brassica oleracea Bo2g165540 I 0.000
Bo2g165560 Brassica oleracea Bo2g165560 I 0.000
Bo3g157380 Brassica oleracea Bo3g157380 I 0.000
Bo4g190160 Brassica oleracea Bo4g190160 I 0.000
Bo6g106450 Brassica oleracea Bo6g106450 I 0.000
Bo7g061750 Brassica oleracea Bo7g061750 I 0.000
Bo7g106320 Brassica oleracea Bo7g106320 I 0.000
Bostr.0556s0470 Boechera stricta Bostr.0556s0470 I 0.000
Bostr.26959s0010 Boechera stricta Bostr.26959s0010 I 0.000
Bostr.30275s0365 Boechera stricta Bostr.30275s0365 I 0.000
Bostr.30275s0431 Boechera stricta Bostr.30275s0431 I 0.000
Bostr.3359s0057 Boechera stricta Bostr.3359s0057 I 0.000
Bra002882 Brassica rapa Bra002882 I 0.000
Bra004272 Brassica rapa Bra004272 I 0.000
Bra012571 Brassica rapa Bra012571 I 0.000
Bra013358 Brassica rapa Bra013358 I 0.000
Bra013406 Brassica rapa Bra013406 I 0.000
Bra013412 Brassica rapa Bra013412 I 0.000
Bra016996 Brassica rapa Bra016996 I 0.000
Bra016998 Brassica rapa Bra016998 I 0.000
Bra029228 Brassica rapa Bra029228 N 0.000
Bra030021 Brassica rapa Bra030021 I 0.000
BRADI3G43710 Brachypodium distachyon BRADI3G43710 I 0.000
Cagra.0096s0075 Capsella grandiflora Cagra.0096s0075 I 0.000
Cagra.13025s0005 Capsella grandiflora Cagra.13025s0005 I 0.000
Cagra.2848s0007 Capsella grandiflora Cagra.2848s0007 I 0.000
Cagra.4306s0004 Capsella grandiflora Cagra.4306s0004 I 0.000
Carubv10004953m.g Capsella rubella Carubv10004953m.g I 0.000
Carubv10007333m.g Capsella rubella Carubv10007333m.g I 0.000
Carubv10014950m.g Capsella rubella Carubv10014950m.g N 0.000
Carubv10021131m.g Capsella rubella Carubv10021131m.g I 0.000
Carubv10027643m.g Capsella rubella Carubv10027643m.g I 0.000
cassava14764.m1 Manihot esculenta cassava14764.m1 I 0.000
cassava24811.valid.m1 Manihot esculenta cassava24811.valid.m1 I 0.000
cassava7697.valid.m1 Manihot esculenta cassava7697.valid.m1 I 0.000
Ca_00428 Cicer arietinum Ca_00428 I 0.000
Ca_08627 Cicer arietinum Ca_08627 I 0.000
Ca_10406 Cicer arietinum Ca_10406 I 0.000
CHLREDRAFT_117914 Chlamydomonas reinhardtii CHLREDRAFT_117914 I 0.000
chr4.CM0046.500.nc Lotus japonicus chr4.CM0046.500.nc I 0.000
chr6.CM0118.920.nd Lotus japonicus chr6.CM0118.920.nd I 0.000
Contig10067.0.g63 Oxytricha trifallax Contig10067.0.g63 I 0.000
Contig10723.0.g13 Oxytricha trifallax Contig10723.0.g13 I 0.000
ENSAMEG00000017238 Ailuropoda melanoleuca ENSAMEG00000017238 I 0.000
ENSBTAP00000004568-D1 Bos grunniens ENSBTAP00000004568-D1 I 0.000
ENSCSAG00000003768 Chlorocebus sabaeus ENSCSAG00000003768 I 0.000
ENSLACG00000013265 Latimeria chalumnae ENSLACG00000013265 I 0.000
ENSLOCG00000007411 Lepisosteus oculatus ENSLOCG00000007411 I 0.000
ENSMPUG00000005418 Mustela putorius furo ENSMPUG00000005418 I 0.000
ENSNLEG00000004338 Nomascus leucogenys ENSNLEG00000004338 I 0.000
ENSOARG00000002740 Ovis aries ENSOARG00000002740 I 0.000
ENSPANG00000005017 Papio anubis ENSPANG00000005017 I 0.000
ENSPPYG00000007441 Pongo abelii ENSPPYG00000007441 I 0.000
ENSSTOG00000027009 Ictidomys tridecemlineatus ENSSTOG00000027009 I 0.000
estExt_Genewise1.C_310312 Physcomitrella patens estExt_Genewise1.C_310312 I 0.000
estExt_Genewise1.C_510007 Bigelowiella natans estExt_Genewise1.C_510007 I 0.000
Eucgr.A01948 Eucalyptus grandis Eucgr.A01948 I 0.000
Eucgr.C00873 Eucalyptus grandis Eucgr.C00873 I 0.000
Eucgr.E02813 Eucalyptus grandis Eucgr.E02813 I 0.000
Eucgr.L01331 Eucalyptus grandis Eucgr.L01331 I 0.000
EuGene.0200010072 Micromonas sp RCC299 EuGene.0200010072 I 0.000
evm.TU.supercontig_2.169 Carica papaya evm.TU.supercontig_2.169 I 0.000
e_gw.355.83.1 Branchiostoma floridae e_gw.355.83.1 N 0.000
e_gw.355.85.1 Branchiostoma floridae e_gw.355.85.1 N 0.000
F775_00937 Aegilops tauschii F775_00937 I 0.000
fgenesh1_pg.C_scaffold_7000870 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7000870 I 0.000
FIBRA_02011 Fibroporia radiculosa FIBRA_02011 I 0.000
FOMPIDRAFT_1100359 Fomitopsis pinicola FOMPIDRAFT_1100359 I 0.000
gene23802-v1.0-hybrid Fragaria vesca gene23802-v1.0-hybrid I 0.000
GLOTRDRAFT_35422 Gloeophyllum trabeum GLOTRDRAFT_35422 I 0.000
GLYMA05G29470 Glycine max GLYMA05G29470 I 0.000
GLYMA08G12630 Glycine max GLYMA08G12630 I 0.000
GLYMA13G29760 Glycine max GLYMA13G29760 I 0.000
GLYMA16G13400 Glycine max GLYMA16G13400 I 0.000
Gorai.009G032300 Gossypium raimondii Gorai.009G032300 I 0.000
Gorai.010G240800 Gossypium raimondii Gorai.010G240800 I 0.000
Gorai.011G036400 Gossypium raimondii Gorai.011G036400 I 0.000
Gorai.N013300 Gossypium raimondii Gorai.N013300 I 0.000
GRMZM2G179802 Zea mays GRMZM2G179802 I 0.000
gw1.42.207.1 Physcomitrella patens gw1.42.207.1 I 0.000
HSF1 Anolis carolinensis ENSACAG00000012604 I 0.000
hsf1 Xenopus laevis XB-GENE-997145 I 0.000
hsf1 Danio rerio ENSDARG00000008818 I 0.000
hsf1.S Xenopus laevis XB-GENE-997146 I 0.000
HSF2 Phaeodactylum tricornutum Phatr3_J55070 N 0.000
HSF4 Loxodonta africana ENSLAFG00000021984 I 0.000
HSF4 Microcebus murinus ENSMICG00000007714 I 0.000
HSF4 Pteropus vampyrus ENSPVAG00000000402 I 0.000
HSF4 Myotis lucifugus ENSMLUG00000011083 I 0.000
HSF4 Macaca mulatta ENSMMUG00000005906 I 0.000
HSF4 Pan troglodytes ENSPTRG00000034007 I 0.000
Hsf4 Mus musculus ENSMUSG00000033249 I 0.000
HSF4 Procavia capensis ENSPCAG00000013012 I 0.000
HSF4 Felis catus ENSFCAG00000014099 I 0.000
Hsf4 Rattus norvegicus ENSRNOG00000015253 I 0.000
HSF4 Sus scrofa ENSSSCG00000002792 I 0.000
HSF4 Oryctolagus cuniculus ENSOCUG00000010001 I 0.000
HSF4 Otolemur garnettii ENSOGAG00000001391 I 0.000
HSF4 Bos taurus ENSBTAG00000003514 I 0.000
HSF4 Canis familiaris ENSCAFG00000020379 I 0.000
HSF4 Cavia porcellus ENSCPOG00000010834 I 0.000
HSF4 Dasypus novemcinctus ENSDNOG00000032363 I 0.000
Hsf4 Dipodomys ordii ENSDORG00000015128 I 0.000
HSF4 Equus caballus ENSECAG00000016708 I 0.000
HSF4 Tursiops truncatus ENSTTRG00000010241 I 0.000
HSF4 Homo sapiens ENSG00000102878 D 0.000
HSF4 Gorilla gorilla ENSGGOG00000011899 I 0.000
HSF4 Ochotona princeps ENSOPRG00000015074 I 0.000
HSFA4A Arabidopsis thaliana AT4G18880 D 0.000
HSFA5 Oryza sativa OS02G0496100 I 0.000
LPERR02G13860 Leersia perrieri LPERR02G13860 I 0.000
LPERR03G28330 Leersia perrieri LPERR03G28330 I 0.000
Lus10005420.g Linum usitatissimum Lus10005420.g I 0.000
Lus10006618.g Linum usitatissimum Lus10006618.g I 0.000
Lus10007318.g Linum usitatissimum Lus10007318.g I 0.000
Lus10015237.g Linum usitatissimum Lus10015237.g I 0.000
Lus10022083.g Linum usitatissimum Lus10022083.g I 0.000
Lus10029269.g Linum usitatissimum Lus10029269.g I 0.000
M404DRAFT_154909 Pisolithus tinctorius M404DRAFT_154909 I 0.000
MDP0000126826 Malus domestica MDP0000126826 I 0.000
mgf006143m Mimulus guttatus mgf006143m I 0.000
mgf006947m Mimulus guttatus mgf006947m I 0.000
MTR_8g087540 Medicago truncatula MTR_8g087540 I 0.000
MTR_8g105780 Medicago truncatula MTR_8g105780 I 0.000
OB01G39790 Oryza brachyantha OB01G39790 I 0.000
OB03G40890 Oryza brachyantha OB03G40890 I 0.000
OGLUM02G17550 Oryza glumaepatula OGLUM02G17550 I 0.000
OMERI02G17330 Oryza meridionalis OMERI02G17330 I 0.000
ONIVA02G18700 Oryza nivara ONIVA02G18700 I 0.000
OPUNC01G15930 Oryza punctata OPUNC01G15930 I 0.000
OPUNC02G15430 Oryza punctata OPUNC02G15430 I 0.000
OPUNC03G31000 Oryza punctata OPUNC03G31000 I 0.000
orange1.1g015635m.g Citrus sinensis orange1.1g015635m.g I 0.000
ORUFI02G18130 Oryza rufipogon ORUFI02G18130 I 0.000
PAXRUDRAFT_162335 Paxillus rubicundulus PAXRUDRAFT_162335 I 0.000
PGSC0003DMG400016270 Solanum tuberosum PGSC0003DMG400016270 I 0.000
PGSC0003DMG400028414 Solanum tuberosum PGSC0003DMG400028414 I 0.000
PHLGIDRAFT_68835 Phlebiopsis gigantea PHLGIDRAFT_68835 I 0.000
PISMIDRAFT_106875 Pisolithus microcarpus PISMIDRAFT_106875 I 0.000
PK09831.1 Cannabis sativa PK09831.1 I 0.000
Pm005887 Prunus mume Pm005887 I 0.000
Pm010169 Prunus mume Pm010169 I 0.000
POPTR_0008s13620 Populus trichocarpa POPTR_0008s13620 I 0.000
POPTR_0011s06820 Populus trichocarpa POPTR_0011s06820 I 0.000
PRUPE_ppa006514mg Prunus persica PRUPE_ppa006514mg I 0.000
PRUPE_ppa006534mg Prunus persica PRUPE_ppa006534mg I 0.000
RO3G_10499 Rhizopus oryzae RO3G_10499 I 0.000
SapurV1A.0015s0620 Salix purpurea SapurV1A.0015s0620 I 0.000
SapurV1A.0086s0550 Salix purpurea SapurV1A.0086s0550 I 0.000
scaffold_601314.1 Arabidopsis lyrata scaffold_601314.1 I 0.000
SCLCIDRAFT_1218516 Scleroderma citrinum SCLCIDRAFT_1218516 I 0.000
SERLA73DRAFT_60481 Serpula lacrymans SERLA73DRAFT_60481 I 0.000
Si019082m.g Setaria italica Si019082m.g I 0.000
Solyc02g072000.2 Solanum lycopersicum Solyc02g072000.2 I 0.000
Solyc06g053960.2 Solanum lycopersicum Solyc06g053960.2 I 0.000
Solyc07g040680.2 Solanum lycopersicum Solyc07g040680.2 I 0.000
Solyc09g082670.2 Solanum lycopersicum Solyc09g082670.2 I 0.000
TCM_011279 Theobroma cacao TCM_011279 I 0.000
TCM_029630 Theobroma cacao TCM_029630 I 0.000
TCM_037635 Theobroma cacao TCM_037635 I 0.000
Thhalv10025409m.g Eutrema salsugineum Thhalv10025409m.g I 0.000
Traes_6AS_1537629B3 Triticum aestivum Traes_6AS_1537629B3 I 0.000
V565_116890 Rhizoctonia solani V565_116890 I 0.000
VIT_10s0003g01770 Vitis vinifera VIT_10s0003g01770 I 0.000
VIT_12s0028g01410 Vitis vinifera VIT_12s0028g01410 I 0.000
XP_002942927 Xenopus tropicalis XP_002942927 I 0.000