Scas_Contig597.15 (Saccharomyces castellii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Scas_Contig597.15 T230133_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CUP9
M00059_2.00 		Saccharomyces cerevisiae
TGACABHW
WDVTGTCA		 PBM
Badis et al.(2008)
CUP9_4508 		0.776 0.891
CUP9
M01553_2.00 		Saccharomyces cerevisiae
NWGACAYWWH
DWWRTGTCWN		 PBM
Zhu et al.(2009)
Cup9 		0.776 0.891
CUP9
M07488_2.00 		Saccharomyces cerevisiae
TGACAYAWW
WWTRTGTCA		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0288.1 		0.776 0.891
CUP9
M08576_2.00 		Saccharomyces cerevisiae
TGACAYAWW
WWTRTGTCA		 Misc
DeBoer et al.(2011)
YPL177C_480 		0.776 0.891
TOS8
M02192_2.00 		Saccharomyces cerevisiae
NNNTKACGTMW
WKACGTMANNN		 PBM
Weirauch et al.(2014)
pTH5696 		0.756 0.745
TOS8
M00057_2.00 		Saccharomyces cerevisiae
NNNCRYGNNN
NNNCRYGNNN		 PBM
Badis et al.(2008)
TOS8_2100 		0.756 0.745
TOS8
M07486_2.00 		Saccharomyces cerevisiae
NWTGACAB
VTGTCAWN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0408.1 		0.756 0.745
TOS8
M08574_2.00 		Saccharomyces cerevisiae
NWTGACAB
VTGTCAWN		 Misc
DeBoer et al.(2011)
YGL096W_494 		0.756 0.745
CAGL0H02959g
M02060_2.00 		Candida glabrata
NDTDACRBNN
NNVYGTHAHN		 PBM
Weirauch et al.(2014)
pTH6455 		0.626 0.745
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig597.15 Homeodomain 127 184

Links

Other Homeodomain family TFs
Other Saccharomyces castellii TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCAS_0H01130 Naumovozyma castellii NCAS_0H01130 I 0.867
21608_YPL177C Saccharomyces mikatae 21608_YPL177C I 0.776
22207_YPL177C Saccharomyces paradoxus 22207_YPL177C I 0.776
ZYRO0G22044g Zygosaccharomyces rouxii ZYRO0G22044g I 0.776
TDEL_0F01810 Torulaspora delbrueckii TDEL_0F01810 I 0.776
SU7_3505 Saccharomyces arboricola SU7_3505 I 0.776
24630_YPL177C Saccharomyces bayanus 24630_YPL177C I 0.776
CUP9 Saccharomyces cerevisiae YPL177C D 0.776
ZBAI_07775 Zygosaccharomyces bailii ZBAI_07775 I 0.765
ZBAI_04266 Zygosaccharomyces bailii ZBAI_04266 I 0.765
Kpol_1036p56 Vanderwaltozyma polyspora Kpol_1036p56 I 0.761
8695_YGL096W Saccharomyces paradoxus 8695_YGL096W I 0.756
TBLA_0C03740 Tetrapisispora blattae TBLA_0C03740 I 0.756
SKUD_191904 Saccharomyces kudriavzevii SKUD_191904 I 0.756
TOS8 Saccharomyces cerevisiae YGL096W D 0.756
TPHA_0B02580 Tetrapisispora phaffii TPHA_0B02580 I 0.755
KAFR_0A04370 Kazachstania africana KAFR_0A04370 I 0.755
KNAG_0F02210 Kazachstania naganishii KNAG_0F02210 I 0.752
NDAI_0F02170 Naumovozyma dairenensis NDAI_0F02170 I 0.744
Ecym_2247 Eremothecium cymbalariae Ecym_2247 I 0.742
AGOS_AFL049C Ashbya gossypii AGOS_AFL049C I 0.742
AACERI_AaceriAFL049C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL049C I 0.742
8079_YGL096W Saccharomyces bayanus 8079_YGL096W I 0.741
NDAI_0I01320 Naumovozyma dairenensis NDAI_0I01320 I 0.739
KAFR_0G03650 Kazachstania africana KAFR_0G03650 I 0.733
CAGL0C01551g Candida glabrata CAGL0C01551g I 0.732
KLLA0_B10450g Kluyveromyces lactis KLLA0_B10450g I 0.701
KUCA_T00004797001 Kuraishia capsulata KUCA_T00004797001 I 0.686
PAS_chr3_0590 Komagataella pastoris PAS_chr3_0590 I 0.685
XP_002492817.1 Pichia pastoris XP_002492817.1 I 0.685
CAOG_08013 Capsaspora owczarzaki CAOG_08013 I 0.680
HPODL_01870 Ogataea parapolymorpha HPODL_01870 I 0.676
ENSETEG00000011891 Echinops telfairi ENSETEG00000011891 I 0.654
nRc.2.0.1.g06302 Romanomermis culicivorax nRc.2.0.1.g06302 I 0.645
SAKL0A05610g Lachancea kluyveri SAKL0A05610g I 0.642
KNAG_0M00500 Kazachstania naganishii KNAG_0M00500 I 0.638
Kwal_11092 Kluyveromyces waltii Kwal_11092 I 0.637
BAUCODRAFT_212345 Baudoinia compniacensis BAUCODRAFT_212345 I 0.632
DOTSEDRAFT_23295 Dothistroma septosporum DOTSEDRAFT_23295 I 0.632
SEPMUDRAFT_148705 Sphaerulina musiva SEPMUDRAFT_148705 I 0.632
DI09_143p10 Microsporidia sp DI09_143p10 I 0.628
CAGL0H02959g Candida glabrata CAGL0H02959g D 0.626
KLTH0H05236g Kluyveromyces thermotolerans KLTH0H05236g I 0.624
KLTH0H05236g Lachancea thermotolerans KLTH0H05236g I 0.624
O9G_002924 Rozella allomycis O9G_002924 I 0.623
AUEXF2481DRAFT_26059 Aureobasidium subglaciale AUEXF2481DRAFT_26059 I 0.622
M438DRAFT_396225 Aureobasidium pullulans M438DRAFT_396225 I 0.622
M437DRAFT_13662 Aureobasidium melanogenum M437DRAFT_13662 I 0.622
PTSG_05211 Salpingoeca rosetta PTSG_05211 I 0.619
7936_YGL096W Saccharomyces mikatae 7936_YGL096W I 0.618
ENSPVAG00000016033 Pteropus vampyrus ENSPVAG00000016033 I 0.617
Mycgr3G91768 Zymoseptoria tritici Mycgr3G91768 I 0.613
fgenesh1_pg.C_chr_3000478 Mycosphaerella graminicola fgenesh1_pg.C_chr_3000478 I 0.613
ADAC004901 Anopheles darlingi ADAC004901 I 0.600
AAEL014550 Aedes aegypti AAEL014550 I 0.600