Scas_Contig613.11 (Saccharomyces castellii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Scas_Contig613.11 T230134_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAD26261
M02055_2.00
Encephalitozoon cuniculi
NNYAATWWA

TWWATTRNN
PBM
Weirauch et al.(2014)
pTH6363
0.640 0.456
NEMVEDRAFT_v1g105595
M02143_2.00
Nematostella vectensis
NTWATWRN

NYWATWAN
PBM
Weirauch et al.(2014)
pTH5503
0.627 0.368
PHO2
M00056_2.00
Saccharomyces cerevisiae
TAATAWWW

WWWTATTA
PBM
Badis et al.(2008)
PHO2_2074
0.600 0.684
PHO2
M01551_2.00
Saccharomyces cerevisiae
NYAATWWHN

NDWWATTRN
PBM
Zhu et al.(2009)
Pho2
0.600 0.684
PHO2
M02190_2.00
Saccharomyces cerevisiae
NNNDNATNDN

NHNATNHNNN
PBM
Weirauch et al.(2014)
pTH6406
0.600 0.684
PHO2
M07485_2.00
Saccharomyces cerevisiae
WTAWTW

WAWTAW
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0356.1
0.600 0.684
PHO2
M08572_2.00
Saccharomyces cerevisiae
WTAWTW

WAWTAW
Misc
DeBoer et al.(2011)
YDL106C_505
0.600 0.684
PHO2
M09583_2.00
Saccharomyces cerevisiae
BCCACGTGCY

RGCACGTGGV
Misc
Heinz et al.(2010)
Yeast-Pho2_GSE29506
0.600 0.684
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig613.11 Homeodomain 94 150

Links

Other Homeodomain family TFs
Other Saccharomyces castellii TFs

Invalid Input OrderBy

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action