SMU15029512 (Schmidtea mediterranea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SMU15029512 T230279_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Dbx1
M00451_2.00
Mus musculus
WTTAATTA

TAATTAAW
PBM
Berger et al.(2008)
Dbx1_3486
0.709 0.768
Dbx2
M00499_2.00
Mus musculus
NNDTNNN

NNNAHNN
PBM
Berger et al.(2008)
Dbx2_3487
0.684 0.696
Dbx
M02128_2.00
Drosophila melanogaster
WTTAATTA

TAATTAAW
PBM
Weirauch et al.(2014)
pTH6051
0.672 0.786
Dbx
M06550_2.00
Drosophila melanogaster
TTWATKA

TMATWAA
B1H
Mathelier et al.(2014)
MA0174.1
0.672 0.786
Q0N4H2_NEMVE
M02163_2.00
Nematostella vectensis
TAATYRVT

ABYRATTA
PBM
Weirauch et al.(2014)
pTH6303
0.633 0.429
Q0N4H7_NEMVE
M02164_2.00
Nematostella vectensis
NNDAYNDNNN

NNNHNRTHNN
PBM
Weirauch et al.(2014)
pTH6472
0.625 0.500
NEMVEDRAFT_v1g114268
M02145_2.00
Nematostella vectensis
WTAATBGRT

AYCVATTAW
PBM
Weirauch et al.(2014)
pTH6514
0.619 0.464
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15029512 Homeodomain 142 197

Links

Other Homeodomain family TFs
Other Schmidtea mediterranea TFs

Invalid Input OrderBy

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action