SMU15032021 (Schmidtea mediterranea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SMU15032021 T230294_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Dbx1
M00451_2.00
Mus musculus
WTTAATTA

TAATTAAW
PBM
Berger et al.(2008)
Dbx1_3486
0.709 0.750
Dbx2
M00499_2.00
Mus musculus
NNDTNNN

NNNAHNN
PBM
Berger et al.(2008)
Dbx2_3487
0.685 0.679
Dbx
M02128_2.00
Drosophila melanogaster
WTTAATTA

TAATTAAW
PBM
Weirauch et al.(2014)
pTH6051
0.672 0.732
Dbx
M06550_2.00
Drosophila melanogaster
TTWATKA

TMATWAA
B1H
Mathelier et al.(2014)
MA0174.1
0.672 0.732
Q0N4H7_NEMVE
M02164_2.00
Nematostella vectensis
NNDAYNDNNN

NNNHNRTHNN
PBM
Weirauch et al.(2014)
pTH6472
0.625 0.464
Q0N4H2_NEMVE
M02163_2.00
Nematostella vectensis
TAATYRVT

ABYRATTA
PBM
Weirauch et al.(2014)
pTH6303
0.621 0.411
NEMVEDRAFT_v1g114268
M02145_2.00
Nematostella vectensis
WTAATBGRT

AYCVATTAW
PBM
Weirauch et al.(2014)
pTH6514
0.619 0.429
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15032021 Homeodomain 220 275

Links

Other Homeodomain family TFs
Other Schmidtea mediterranea TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SMU15029512 Schmidtea mediterranea SMU15029512 I 0.847
HelroG74087 Helobdella robusta HelroG74087 I 0.846
EFV57815 Trichinella spiralis EFV57815 I 0.789
D917_00900 Trichinella nativa D917_00900 I 0.789
nRc.2.0.1.g17174 Romanomermis culicivorax nRc.2.0.1.g17174 I 0.717
ENSLACG00000011299 Latimeria chalumnae ENSLACG00000011299 I 0.709
Ocbimv22005553m.g Octopus bimaculoides Ocbimv22005553m.g I 0.709
DBX1 Loxodonta africana ENSLAFG00000007378 I 0.709
ENSLOCG00000004886 Lepisosteus oculatus ENSLOCG00000004886 I 0.709
ENSMGAG00000002299 Meleagris gallopavo ENSMGAG00000002299 I 0.709
ENSSHAG00000011774 Sarcophilus harrisii ENSSHAG00000011774 I 0.709
DBX1 Sus scrofa ENSSSCG00000013350 I 0.709
DBX1 Gallus gallus ENSGALG00000003965 I 0.709
DBX1 Tetraodon nigroviridis ENSTNIG00000004855 I 0.709
DBX1 Homo sapiens ENSG00000109851 I 0.709
ENSGACG00000000220 Gasterosteus aculeatus ENSGACG00000000220 I 0.709
Dbx1 Rattus norvegicus ENSRNOG00000014706 I 0.709
ENSSTOG00000015557 Ictidomys tridecemlineatus ENSSTOG00000015557 I 0.709
DBX1 Taeniopygia guttata ENSTGUG00000015791 I 0.709
ENSGMOG00000003244 Gadus morhua ENSGMOG00000003244 I 0.709
ENSPFOG00000014727 Poecilia formosa ENSPFOG00000014727 I 0.709
ENSOARG00000008379 Ovis aries ENSOARG00000008379 I 0.709
Tal_R010631 Tyto alba Tal_R010631 I 0.709
dbx1b Oryzias latipes ENSORLG00000000807 I 0.709
DBX1 Oryctolagus cuniculus ENSOCUG00000007615 I 0.709
DBX1 Otolemur garnettii ENSOGAG00000014591 I 0.709
fgenesh2_pg.scaffold_222000058 Branchiostoma floridae fgenesh2_pg.scaffold_222000058 I 0.709
DBX1 Oryzias latipes ENSORLG00000014512 I 0.709
Dbx1 Mus musculus ENSMUSG00000030507 D 0.709
DBX1 Felis catus ENSFCAG00000028654 I 0.709
ENSPMAG00000004878 Petromyzon marinus ENSPMAG00000004878 I 0.709
DBX1 Monodelphis domestica ENSMODG00000009081 I 0.709
LotgiG64310 Lottia gigantea LotgiG64310 I 0.709
ENSMPUG00000013914 Mustela putorius furo ENSMPUG00000013914 I 0.709
ENSPFOG00000004028 Poecilia formosa ENSPFOG00000004028 I 0.709
ENSPSIG00000012138 Pelodiscus sinensis ENSPSIG00000012138 I 0.709
dbx1b Tetraodon nigroviridis ENSTNIG00000009613 I 0.709
Afo_R010414 Aptenodytes forsteri Afo_R010414 I 0.709
DBX1 Bos taurus ENSBTAG00000002733 I 0.709
Alligator_sinensis_CCG013033.1 Alligator sinensis Alligator_sinensis_CCG013033.1 I 0.709
Brh_R002799 Buceros rhinoceros Brh_R002799 I 0.709
ENSONIG00000007144 Oreochromis niloticus ENSONIG00000007144 I 0.709
DBX1 Callithrix jacchus ENSCJAG00000006734 I 0.709
ENSAPLG00000013752 Anas platyrhynchos ENSAPLG00000013752 I 0.709
Aan_R006646 Calypte anna Aan_R006646 I 0.709
CGI_10002480 Crassostrea gigas CGI_10002480 I 0.709
CapteG220261 Capitella teleta CapteG220261 I 0.709
dbx1.S Xenopus laevis XB-GENE-865351 I 0.709
DBX1 Anolis carolinensis ENSACAG00000015625 I 0.709
ENSAMXG00000016737 Astyanax mexicanus ENSAMXG00000016737 I 0.709
ENSAMXG00000012905 Astyanax mexicanus ENSAMXG00000012905 I 0.709
ENSBTAP00000003543-D1 Bos grunniens ENSBTAP00000003543-D1 I 0.709
Cmyd_10016425 Chelonia mydas Cmyd_10016425 I 0.709
Pvit_06412 Pogona vitticeps Pvit_06412 I 0.709
ENSXMAG00000006476 Xiphophorus maculatus ENSXMAG00000006476 I 0.709
dbx1b Takifugu rubripes ENSTRUG00000015886 I 0.709
DBX1 Equus caballus ENSECAG00000019994 I 0.709
ENSFALG00000001676 Ficedula albicollis ENSFALG00000001676 I 0.709
dbx1 Xenopus tropicalis XB-GENE-480177 I 0.709
dbx1a Danio rerio ENSDARG00000086393 I 0.709
DBX1 Dasypus novemcinctus ENSDNOG00000015450 I 0.709
ENSCSAG00000005115 Chlorocebus sabaeus ENSCSAG00000005115 I 0.709
dbx1b Danio rerio ENSDARG00000001859 I 0.709
ENSXMAG00000010186 Xiphophorus maculatus ENSXMAG00000010186 I 0.709
ENSONIG00000012709 Oreochromis niloticus ENSONIG00000012709 I 0.707
DBX1 Cavia porcellus ENSCPOG00000019811 I 0.705
ENSCING00000012835 Ciona intestinalis ENSCING00000012835 I 0.705
Sakowv30044972m.g Saccoglossus kowalevskii Sakowv30044972m.g I 0.705
DBX1 Gasterosteus aculeatus ENSGACG00000014112 I 0.705
BGLB013811 Biomphalaria glabrata BGLB013811 I 0.705
TriadG18102 Trichoplax adhaerens TriadG18102 I 0.699
ENSLOCG00000016431 Lepisosteus oculatus ENSLOCG00000016431 I 0.692
ENSAMXG00000014548 Astyanax mexicanus ENSAMXG00000014548 I 0.690
ENSSHAG00000012659 Sarcophilus harrisii ENSSHAG00000012659 I 0.687
DBX2 Monodelphis domestica ENSMODG00000018530 I 0.687
ENSMEUG00000016510 Macropus eugenii ENSMEUG00000016510 I 0.687
ENSTSYG00000001451 Tarsius syrichta ENSTSYG00000001451 I 0.685
DBX2 Tursiops truncatus ENSTTRG00000003582 I 0.685
Myotis_brandtii_DBX2_10029487 Myotis brandtii Myotis_brandtii_DBX2_10029487 I 0.685
Gfo_R004056 Geospiza fortis Gfo_R004056 I 0.685
ENSVPAG00000000460 Vicugna pacos ENSVPAG00000000460 I 0.685
DBX2 Dasypus novemcinctus ENSDNOG00000046429 I 0.685
DBX2 Otolemur garnettii ENSOGAG00000008999 I 0.685
DBX2 Homo sapiens ENSG00000185610 I 0.685
ENSFALG00000010170 Ficedula albicollis ENSFALG00000010170 I 0.685
DBX2 Equus caballus ENSECAG00000012695 I 0.685
ENSP00000331470 Macaca fascicularis ENSP00000331470 I 0.685
ENSP00000331470-D1 Bos grunniens ENSP00000331470-D1 I 0.685
Aan_R012348 Calypte anna Aan_R012348 I 0.685
ENSAPLG00000011161 Anas platyrhynchos ENSAPLG00000011161 I 0.685
ENSAMEG00000015811 Ailuropoda melanoleuca ENSAMEG00000015811 I 0.685
ENSACAG00000002581 Anolis carolinensis ENSACAG00000002581 I 0.685
Afo_R000355 Aptenodytes forsteri Afo_R000355 I 0.685
DBX2 Bos taurus ENSBTAG00000006635 I 0.685
ENSCPOG00000011069 Cavia porcellus ENSCPOG00000011069 I 0.685
DBX2 Callithrix jacchus ENSCJAG00000013213 I 0.685
Brh_R003637 Buceros rhinoceros Brh_R003637 I 0.685
ENSCAFG00000009372 Canis familiaris ENSCAFG00000009372 I 0.685
DBX2 Taeniopygia guttata ENSTGUG00000006020 I 0.685
DBX2 Gallus gallus ENSGALG00000009604 I 0.685
Tal_R005491 Tyto alba Tal_R005491 I 0.685
ENSMPUG00000000372 Mustela putorius furo ENSMPUG00000000372 I 0.685
ENSMMUG00000022290 Macaca mulatta ENSMMUG00000022290 I 0.685
ENSMLUG00000007038 Myotis lucifugus ENSMLUG00000007038 I 0.685
ENSPPYG00000004431 Pongo abelii ENSPPYG00000004431 I 0.685
DBX2 Procavia capensis ENSPCAG00000006299 I 0.685
ENSPANG00000005953 Papio anubis ENSPANG00000005953 I 0.685
ENSOCUG00000022068 Oryctolagus cuniculus ENSOCUG00000022068 I 0.685
ENSOARG00000019598 Ovis aries ENSOARG00000019598 I 0.685
ENSNLEG00000017924 Nomascus leucogenys ENSNLEG00000017924 I 0.685
Dbx2 Mus musculus ENSMUSG00000045608 D 0.685
ENSPSIG00000009557 Pelodiscus sinensis ENSPSIG00000009557 I 0.685
ENSMICG00000007764 Microcebus murinus ENSMICG00000007764 I 0.685
ENSSARG00000007797 Sorex araneus ENSSARG00000007797 I 0.685
DBX2 Loxodonta africana ENSLAFG00000005006 I 0.685
ENSSTOG00000000232 Ictidomys tridecemlineatus ENSSTOG00000000232 I 0.685
DBX2 Gorilla gorilla ENSGGOG00000004664 I 0.685
DBX2 Tupaia belangeri ENSTBEG00000012639 I 0.685
ENSMGAG00000009614 Meleagris gallopavo ENSMGAG00000009614 I 0.685
DBX2 Pan troglodytes ENSPTRG00000004849 I 0.685
Dbx2 Rattus norvegicus ENSRNOG00000006885 I 0.685
dbx2 Xenopus tropicalis XB-GENE-481734 I 0.683
CABZ01093502.1 Danio rerio ENSDARG00000105053 I 0.683
ENSLACG00000003968 Latimeria chalumnae ENSLACG00000003968 I 0.683
dbx2.L Xenopus laevis XB-GENE-6486281 I 0.683
Pvit_11516 Pogona vitticeps Pvit_11516 I 0.683
ENSTNIG00000015979 Tetraodon nigroviridis ENSTNIG00000015979 I 0.679
ENSPFOG00000008292 Poecilia formosa ENSPFOG00000008292 I 0.679
ENSTRUG00000016696 Takifugu rubripes ENSTRUG00000016696 I 0.679
ENSORLG00000002970 Oryzias latipes ENSORLG00000002970 I 0.679
ENSGMOG00000009056 Gadus morhua ENSGMOG00000009056 I 0.679
ENSGACG00000004000 Gasterosteus aculeatus ENSGACG00000004000 I 0.679
ENSXMAG00000004689 Xiphophorus maculatus ENSXMAG00000004689 I 0.679
ENSONIG00000008764 Oreochromis niloticus ENSONIG00000008764 I 0.679
tetur05g09190 Tetranychus urticae tetur05g09190 I 0.674
ISCW020093 Ixodes scapularis ISCW020093 I 0.674
GH16166 Drosophila grimshawi FBgn0123637 I 0.672
MDOA015219 Musca domestica MDOA015219 I 0.672
GG14836 Drosophila erecta FBgn0107091 I 0.672
GI13319 Drosophila mojavensis FBgn0136076 I 0.672
GL25317 Drosophila persimilis FBgn0162901 I 0.672
GJ12089 Drosophila virilis FBgn0199341 I 0.672
GM14459 Drosophila sechellia FBgn0169382 I 0.672
GF20095 Drosophila ananassae FBgn0097102 I 0.672
AAEL005974 Aedes aegypti AAEL005974 I 0.672
ACOM031223 Anopheles coluzzii ACOM031223 I 0.672
AMEM006151 Anopheles merus AMEM006151 I 0.672
AATE018929 Anopheles atroparvus AATE018929 I 0.672
AGAP005727 Anopheles gambiae AGAP005727 I 0.672
GK12528 Drosophila willistoni FBgn0214538 I 0.672
KGM_12383 Danaus plexippus KGM_12383 I 0.672
LLOJ006552 Lutzomyia longipalpis LLOJ006552 I 0.672
GA11582 Drosophila pseudoobscura FBgn0071633 I 0.672
GE21201 Drosophila yakuba FBgn0238476 I 0.672
NV18099 Nasonia vitripennis NV18099 I 0.672
TC015146 Tribolium castaneum TC015146 I 0.672
PHUM365830 Pediculus humanus PHUM365830 I 0.672
GB49362 Apis mellifera GB49362 I 0.672
YQE_05944 Dendroctonus ponderosae YQE_05944 I 0.672
Dbx Drosophila melanogaster FBgn0261723 D 0.672
ACYPI27939 Acyrthosiphon pisum ACYPI27939 I 0.670
ENSEEUG00000006518 Erinaceus europaeus ENSEEUG00000006518 I 0.669
DAPPUDRAFT_37379 Daphnia pulex DAPPUDRAFT_37379 I 0.668
TTAC_0000915701 Hydatigera taeniaeformis TTAC_0000915701 I 0.655
TsM_000892700 Taenia solium TsM_000892700 I 0.655
EmuJ_000915650 Echinococcus multilocularis EmuJ_000915650 I 0.655
ECANG7_06581 Echinococcus canadensis ECANG7_06581 I 0.655
TsM_000611800 Taenia solium TsM_000611800 I 0.655
TASK_0000469001 Taenia asiatica TASK_0000469001 I 0.655
D915_05896 Fasciola hepatica D915_05896 I 0.652
SMRZ_0000721601 Schistosoma margrebowiei SMRZ_0000721601 I 0.652
Sjc_0105010 Schistosoma japonicum Sjc_0105010 I 0.652
T265_09780 Opisthorchis viverrini T265_09780 I 0.652
A_02406 Schistosoma haematobium A_02406 I 0.652
csin102876 Clonorchis sinensis csin102876 I 0.652
PXEA_0002165701 Protopolystoma xenopodis PXEA_0002165701 I 0.652
SMTD_0002243101 Schistosoma mattheei SMTD_0002243101 I 0.652
SCUD_0001655801 Schistosoma curassoni SCUD_0001655801 I 0.652
SMU15037895 Schmidtea mediterranea SMU15037895 I 0.649
SMU15012780 Schmidtea mediterranea SMU15012780 I 0.649
ENSLACG00000015207 Latimeria chalumnae ENSLACG00000015207 I 0.647
ENSCSAVG00000011424 Ciona savignyi ENSCSAVG00000011424 N 0.647
ECPE_0001225801 Echinostoma caproni ECPE_0001225801 I 0.646
gw.473.22.1 Branchiostoma floridae gw.473.22.1 I 0.642
NEMVEDRAFT_v1g114232 Nematostella vectensis NEMVEDRAFT_v1g114232 I 0.642
NEMVEDRAFT_v1g47235 Nematostella vectensis NEMVEDRAFT_v1g47235 I 0.642
DILT_0000534401 Diphyllobothrium latum DILT_0000534401 I 0.639
HMEL025049 Heliconius melpomene HMEL025049 I 0.639
SSLN_0001304301 Schistocephalus solidus SSLN_0001304301 I 0.639
SPER_0003105501 Spirometra erinaceieuropaei SPER_0003105501 I 0.639
SPER_0001880401 Spirometra erinaceieuropaei SPER_0001880401 I 0.639
Q0N4H7_NEMVE Nematostella vectensis Q0N4H7_NEMVE D 0.625
NEMVEDRAFT_v1g69052 Nematostella vectensis NEMVEDRAFT_v1g69052 I 0.621
Q0N4H2_NEMVE Nematostella vectensis Q0N4H2_NEMVE D 0.621
NEMVEDRAFT_v1g80365 Nematostella vectensis NEMVEDRAFT_v1g80365 I 0.620
NEMVEDRAFT_v1g100892 Nematostella vectensis NEMVEDRAFT_v1g100892 I 0.620
LotgiG80492 Lottia gigantea LotgiG80492 I 0.620
HelroG148518 Helobdella robusta HelroG148518 I 0.620
Ocbimv22023837m.g Octopus bimaculoides Ocbimv22023837m.g I 0.619
MCINX005605 Melitaea cinxia MCINX005605 I 0.619
NEMVEDRAFT_v1g17677 Nematostella vectensis NEMVEDRAFT_v1g17677 I 0.619
NEMVEDRAFT_v1g114268 Nematostella vectensis NEMVEDRAFT_v1g114268 D 0.619
DAPPUDRAFT_53297 Daphnia pulex DAPPUDRAFT_53297 I 0.618
NEMVEDRAFT_v1g80987 Nematostella vectensis NEMVEDRAFT_v1g80987 I 0.613
gw.83.80.1 Branchiostoma floridae gw.83.80.1 I 0.611
hlx Ciona intestinalis ENSCING00000019191 I 0.606
KGM_13131 Danaus plexippus KGM_13131 I 0.601