SNAPOd2T00004534001 (Oikopleura dioica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SNAPOd2T00004534001 T230336_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN

NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.799 0.630
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN

NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.799 0.630
VSX1
M04941_2.00
Homo sapiens
YYAATTRN

NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.799 0.630
VSX1
M04944_2.00
Homo sapiens
NTAATTRS

SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.799 0.630
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN

NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.799 0.630
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN

NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.799 0.630
VSX1
M04943_2.00
Homo sapiens
YYAATTRN

NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.799 0.630
VSX1
M04945_2.00
Homo sapiens
NTAATTRG

CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.799 0.630
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN

NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.799 0.630
VAX1
M03168_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.726 0.435
VAX1
M05182_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.726 0.435
VAX1
M05183_2.00
Homo sapiens
BTMATKRN

NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.726 0.435
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00004534001 Homeodomain 33 78

Links

Other Homeodomain family TFs
Other Oikopleura dioica TFs

1241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
VDBG_08003 Verticillium albo atrum VDBG_08003 N 0.000
NechaG35170 Fusarium solani NechaG35170 N 0.000
OCS_03494 Ophiocordyceps sinensis OCS_03494 N 0.000
S40285_07596 Stachybotrys chlorohalonata S40285_07596 N 0.000
S40288_03002 Stachybotrys chartarum S40288_03002 N 0.000
TRIATDRAFT_284947 Trichoderma atroviride TRIATDRAFT_284947 N 0.000
TRIREDRAFT_79673 Trichoderma reesei TRIREDRAFT_79673 N 0.000
TRIVIDRAFT_76678 Trichoderma virens TRIVIDRAFT_76678 N 0.000
UV8b_1442 Ustilaginoidea virens UV8b_1442 N 0.000
VDAG_05574 Verticillium dahliae VDAG_05574 N 0.000
VDBG_08003 Verticillium alfalfae VDBG_08003 N 0.000
VHEMI06839 Torrubiella hemipterigena VHEMI06839 N 0.000
MGU_00497 Metarhizium guizhouense MGU_00497 N 0.000
MBR_02516 Metarhizium brunneum MBR_02516 N 0.000
BBA_05630 Beauveria bassiana BBA_05630 N 0.000
CCM_04623 Cordyceps militaris CCM_04623 N 0.000
CFIO01_08239 Colletotrichum fioriniae CFIO01_08239 N 0.000
CGGC5_5177 Colletotrichum gloeosporioides CGGC5_5177 N 0.000
CH063_01997 Colletotrichum higginsianum CH063_01997 N 0.000
CPUR_03494 Claviceps purpurea CPUR_03494 N 0.000
CSUB01_01955 Colletotrichum sublineola CSUB01_01955 N 0.000
MAC_03499 Metarhizium acridum MAC_03499 N 0.000
MAJ_00122 Metarhizium majus MAJ_00122 N 0.000
MAM_00759 Metarhizium album MAM_00759 N 0.000
MANI_028548 Metarhizium anisopliae MANI_028548 N 0.000
e_gw1.2.1437.1 Nectria haematococca e_gw1.2.1437.1 N 0.000