SNAPOd2T00016055001 (Oikopleura dioica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SNAPOd2T00016055001 T230367_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SNAPOd2T00005194001
M02229_2.00
Oikopleura dioica
NNTACATGTDN

NHACATGTANN
PBM
Weirauch et al.(2014)
pTH5976
0.836 0.772
mirr
M06514_2.00
Drosophila melanogaster
WWACA

TGTWW
B1H
Mathelier et al.(2014)
MA0233.1
0.834 0.807
mirr
M06305_2.00
Drosophila melanogaster
NDNWWACA

TGTWWNHN
B1H
Zhu et al.(2011)
Mirr_Cell_FBgn0014343
0.834 0.807
mirr
M06306_2.00
Drosophila melanogaster
DDWACA

TGTWHH
B1H
Zhu et al.(2011)
Mirr_SOLEXA_FBgn0014343
0.834 0.807
Irx3
M00453_2.00
Mus musculus
NNDACAHNNN

NNNDTGTHNN
PBM
Berger et al.(2008)
Irx3_0920
0.802 0.807
Irx3
M00454_2.00
Mus musculus
NNDACWHN

NDWGTHNN
PBM
Berger et al.(2008)
Irx3_2226
0.802 0.807
Irx3
M03266_2.00
Mus musculus
WWTKTCATGTWR

YWACATGAMAWW
SELEX
Jolma et al.(2013)
Irx3_1
0.802 0.807
IRX1
M05283_2.00
Homo sapiens
DDCRHNNNNNNNNDYGHH

DDCRHNNNNNNNNDYGHH
SELEX
Yin et al.(2017)
IRX1_eDBD_HT-SELEX
0.802 0.807
IRX3
M05319_2.00
Homo sapiens
DACAHGNWWWWNCDTGTH

DACAHGNWWWWNCDTGTH
SELEX
Yin et al.(2017)
IRX3_eDBD_HT-SELEX
0.802 0.807
IRX1
M05284_2.00
Homo sapiens
NNCRHNNNNNNNNDYVHN

NDBRHNNNNNNNNDYGNN
SELEX
Yin et al.(2017)
IRX1_eDBD_Methyl-HT-SELEX
0.802 0.807
IRX3
M05320_2.00
Homo sapiens
DACRYRHNWWNDYKCGTW

WACGMRHNWWNDYRYGTH
SELEX
Yin et al.(2017)
IRX3_eDBD_Methyl-HT-SELEX
0.802 0.807
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00016055001 Homeodomain 46 105

Links

Other Homeodomain family TFs
Other Oikopleura dioica TFs

281 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_036300 Acremonium chrysogenum ACRE_036300 N 0.000
Bcin16g03200 Botrytis cinerea Bcin16g03200 N 0.000
CCM_02695 Cordyceps militaris CCM_02695 N 0.000
CGGC5_6422 Colletotrichum gloeosporioides CGGC5_6422 N 0.000
CH063_15372 Colletotrichum higginsianum CH063_15372 N 0.000
CMQ_7386 Grosmannia clavigera CMQ_7386 N 0.000
Cob_04621 Colletotrichum orbiculare Cob_04621 N 0.000
estExt_fgenesh1_pm.C_sca_19_chr4_3_00096 Nectria haematococca estExt_fgenesh1_pm.C_sca_19_chr4_3_00096 N 0.000
e_gw1.1.252.1 Cryphonectria parasitica e_gw1.1.252.1 N 0.000
F503_03088 Ophiostoma piceae uamh F503_03088 N 0.000
FFUJ_03510 Fusarium fujikuroi FFUJ_03510 N 0.000
FGRRES_06503_M Fusarium graminearum FGRRES_06503_M N 0.000
FOXG_02462 Fusarium oxysporum FOXG_02462 N 0.000
FPSE_01754 Fusarium pseudograminearum FPSE_01754 N 0.000
FVEG_05647 Fusarium verticillioides FVEG_05647 N 0.000
GGTG_12667 Gaeumannomyces graminis GGTG_12667 N 0.000
GLRG_07948 Colletotrichum graminicola GLRG_07948 N 0.000
HMPREF1624_06973 Sporothrix schenckii HMPREF1624_06973 N 0.000
MAC_06318 Metarhizium acridum MAC_06318 N 0.000
MAM_02578 Metarhizium album MAM_02578 N 0.000
MBM_04396 Marssonina brunnea MBM_04396 N 0.000
MGG_07681 Magnaporthe oryzae MGG_07681 N 0.000
MYCTH_2063030 Myceliophthora thermophila MYCTH_2063030 N 0.000
sah-3 Neurospora crassa NCU07535 N 0.000
NechaG104278 Fusarium solani NechaG104278 N 0.000
NEUTE1DRAFT_82727 Neurospora tetrasperma NEUTE1DRAFT_82727 N 0.000
OCS_03381 Ophiocordyceps sinensis OCS_03381 N 0.000
PFICI_11523 Pestalotiopsis fici PFICI_11523 N 0.000
PODANS_7_4800 Podospora anserina PODANS_7_4800 N 0.000
S40285_07091 Stachybotrys chlorohalonata S40285_07091 N 0.000
S40288_09464 Stachybotrys chartarum S40288_09464 N 0.000
SBOR_1790 Sclerotinia borealis SBOR_1790 N 0.000
SMAC_02020 Sordaria macrospora SMAC_02020 N 0.000
SPBR_06536 Sporothrix brasiliensis SPBR_06536 N 0.000
THITE_2118168 Thielavia terrestris THITE_2118168 N 0.000
TRIATDRAFT_127060 Trichoderma atroviride TRIATDRAFT_127060 N 0.000
TRIREDRAFT_123445 Trichoderma reesei TRIREDRAFT_123445 N 0.000
TRIVIDRAFT_38517 Trichoderma virens TRIVIDRAFT_38517 N 0.000
UCRPA7_1286 Togninia minima UCRPA7_1286 N 0.000
UV8b_7055 Ustilaginoidea virens UV8b_7055 N 0.000
VDAG_04205 Verticillium dahliae VDAG_04205 N 0.000
VDBG_04664 Verticillium albo atrum VDBG_04664 N 0.000
VDBG_04664 Verticillium alfalfae VDBG_04664 N 0.000
VHEMI02209 Torrubiella hemipterigena VHEMI02209 N 0.000
X797_007139 Metarhizium robertsii X797_007139 N 0.000