TF Information

hoxc12.L *(Xenopus laevis)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	XB-GENE-6252388	T230558_2.00	Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Hoxc12 M00508_2.00	Mus musculus	NDTWAYNDBN	NVHNRTWAHN	PBM Berger et al.(2008) Hoxc12_3480	0.785	0.895
HOXC12 M03135_2.00	Homo sapiens	TTTTATTRY	RYAATAAAA	SELEX Jolma et al.(2013) HOXC12_1	0.785	0.895
HOXC12 M03136_2.00	Homo sapiens	RRTCGTAAAAH	DTTTTACGAYY	SELEX Jolma et al.(2013) HOXC12_2	0.785	0.895
HOXC12 M05083_2.00	Homo sapiens	NGYAATAAAAN	NTTTTATTRCN	SELEX Yin et al.(2017) HOXC12_eDBD_HT-SELEX_1	0.785	0.895
HOXC12 M05084_2.00	Homo sapiens	VRTCGTAAAHN	NDTTTACGAYB	SELEX Yin et al.(2017) HOXC12_eDBD_HT-SELEX_2	0.785	0.895
HOXC12 M05085_2.00	Homo sapiens	NGYAATAAAAH	DTTTTATTRCN	SELEX Yin et al.(2017) HOXC12_eDBD_Methyl-HT-SELEX_1	0.785	0.895
HOXC12 M05086_2.00	Homo sapiens	NRTCGTAAAHH	DDTTTACGAYN	SELEX Yin et al.(2017) HOXC12_eDBD_Methyl-HT-SELEX_2	0.785	0.895
Hoxd12_CONSTRUCT M00538_2.00	PBM CONSTRUCTS	NWTWAYNDBN	NVHNRTWAWN	PBM Berger et al.(2008) Hoxd12_3481	0.740	0.772
HOXD12 M03206_2.00	Homo sapiens	SYAATAAAA	TTTTATTRS	SELEX Jolma et al.(2013) HOXD12_1	0.740	0.772
HOXD12 M03207_2.00	Homo sapiens	RVTCGTAAAAH	DTTTTACGABY	SELEX Jolma et al.(2013) HOXD12_2	0.740	0.772
HOXD12 M03208_2.00	Homo sapiens	NRTCGTAAAHN	NDTTTACGAYN	SELEX Jolma et al.(2013) HOXD12_3	0.740	0.772
HOXD12 M03209_2.00	Homo sapiens	DTTWATYRC	GYRATWAAH	SELEX Jolma et al.(2013) HOXD12_4	0.740	0.772
HOXD12 M05279_2.00	Homo sapiens	NKTWACGAYN	NRTCGTWAMN	SELEX Yin et al.(2017) HOXD12_eDBD_HT-SELEX	0.740	0.772
HOXD12 M05280_2.00	Homo sapiens	NRTCGTAAAH	DTTTACGAYN	SELEX Yin et al.(2017) HOXD12_eDBD_Methyl-HT-SELEX	0.740	0.772
HXD12_HETFR M02196_2.00	Heterodontus francisci	TTWATKRC	GYMATWAA	PBM Weirauch et al.(2014) pTH6533	0.703	0.754
Abd-B M00554_2.00	Drosophila melanogaster	NWTWAYDDNN	NNHHRTWAWN	PBM Busser et al.(2012a) Abd-B	0.663	0.596
Abd-B M03772_2.00	Drosophila melanogaster	DRTCRTAAAWH	DWTTTAYGAYH	SELEX Nitta et al.(2015) Abd-B_1	0.663	0.596
Abd-B M03773_2.00	Drosophila melanogaster	DTTTTATKRCY	RGYMATAAAAH	SELEX Nitta et al.(2015) Abd-B_2	0.663	0.596
Abd-B M03774_2.00	Drosophila melanogaster	NKCARYAACGACYW	WRGTCGTTRYTGMN	SELEX Nitta et al.(2015) Abd-B_3	0.663	0.596
Abd-B M03775_2.00	Drosophila melanogaster	DTTTWATGKSTTTY	RAAASMCATWAAAH	SELEX Nitta et al.(2015) Abd-B_4	0.663	0.596
Abd-B M06476_2.00	Drosophila melanogaster	TTTATKR	YMATAAA	B1H Mathelier et al.(2014) MA0165.1	0.663	0.596
Abd-B M06211_2.00	Drosophila melanogaster	YCATAAAA	TTTTATGR	B1H Zhu et al.(2011) Abd-B_FlyReg_FBgn0000015	0.663	0.596
Abd-B M09672_2.00	Drosophila melanogaster	YMATAAAAHH	DDTTTTATKR	Misc Kulakovskiy et al.(2009) Abd-B	0.663	0.596
Abd-B M10779_2.00	Drosophila melanogaster	VSNTTDATKRCNNN	NNNGYMATHAANSB	Transfac Matys et al.(2006) I$ABDB_01	0.663	0.596
Abd-B M10780_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$ABDB_Q6	0.663	0.596
For this family, TFs with SR scores > 0.599* will likely have a similar motif*