hdx (Xenopus tropicalis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 XB-GENE-853748 T230621_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HDX
M01246_2.00
Homo sapiens
HNNNNNN

NNNNNND
PBM
Lambert et al.(2019)
pTH11271
0.864 0.946
Hdx
M00463_2.00
Mus musculus
HNWYHNN

NNDRWND
PBM
Berger et al.(2008)
Hdx_3845
0.864 0.946
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI61469 Homeodomain 377 436
XP_002938587 Homeodomain 25 83
XP_002938587 Homeodomain 461 520

Links

Other Homeodomain family TFs
Other Xenopus tropicalis TFs

Invalid Input OrderBy

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action