17440_YML027W (Saccharomyces paradoxus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 17440_YML027W T230771_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YOX1
M00058_2.00
Saccharomyces cerevisiae
HTWAATTR

YAATTWAD
PBM
Badis et al.(2008)
YOX1_2073
0.867 0.982
YOX1
M01552_2.00
Saccharomyces cerevisiae
BWWATDR

YHATWWV
PBM
Zhu et al.(2009)
Yox1
0.867 0.982
YOX1
M07487_2.00
Saccharomyces cerevisiae
YTAATTWN

NWAATTAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1
0.867 0.982
YOX1
M08575_2.00
Saccharomyces cerevisiae
YTAATTWN

NWAATTAR
Misc
DeBoer et al.(2011)
YML027W_498
0.867 0.982
YHP1
M02191_2.00
Saccharomyces cerevisiae
NWWATKRNN

NNYMATWWN
PBM
Weirauch et al.(2014)
pTH6381
0.800 0.702
YHP1
M08423_2.00
Saccharomyces cerevisiae
TAATTG

CAATTA
ChIP-chip
Mathelier et al.(2014)
MA0426.1
0.800 0.702
YHP1
M08573_2.00
Saccharomyces cerevisiae
WNTAATTR

YAATTANW
Misc
DeBoer et al.(2011)
YDR451C_716
0.800 0.702
YHP1
M10797_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$YHP1_01
0.800 0.702
ATEG_04171
M02059_2.00
Aspergillus terreus
BWWATKRNNN

NNNYMATWWV
PBM
Weirauch et al.(2014)
pTH5871
0.623 0.474
yox1
M02174_2.00
Schizosaccharomyces pombe
NNHHATDDNN

NNHHATDDNN
PBM
Weirauch et al.(2014)
pTH6057
0.613 0.456
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
17440_YML027W Homeodomain 177 233

Links

Other Homeodomain family TFs
Other Saccharomyces paradoxus TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
YOX1 Saccharomyces cerevisiae YML027W D 0.867
SU7_2475 Saccharomyces arboricola SU7_2475 I 0.855
KAFR_0C05600 Kazachstania africana KAFR_0C05600 I 0.840
TDEL_0A04320 Torulaspora delbrueckii TDEL_0A04320 I 0.826
TPHA_0D02630 Tetrapisispora phaffii TPHA_0D02630 I 0.811
Kpol_1004p50 Vanderwaltozyma polyspora Kpol_1004p50 I 0.809
CAGL0G07249g Candida glabrata CAGL0G07249g I 0.801
SKUD_123402 Saccharomyces kudriavzevii SKUD_123402 I 0.800
YHP1 Saccharomyces cerevisiae YDR451C D 0.800
SU7_2763 Saccharomyces arboricola SU7_2763 I 0.800
5594_YDR451C Saccharomyces paradoxus 5594_YDR451C I 0.800
5532_YDR451C Saccharomyces bayanus 5532_YDR451C I 0.800
5231_YDR451C Saccharomyces mikatae 5231_YDR451C I 0.800
ZYRO0D13596g Zygosaccharomyces rouxii ZYRO0D13596g I 0.790
ZBAI_03698 Zygosaccharomyces bailii ZBAI_03698 I 0.789
ZBAI_09382 Zygosaccharomyces bailii ZBAI_09382 I 0.789
LALA0_S09e00364g Lachancea lanzarotensis LALA0_S09e00364g I 0.786
CORT_0H00310 Candida orthopsilosis CORT_0H00310 I 0.785
CPAG_00635 Candida parapsilosis CPAG_00635 I 0.784
PGUG_00382 Meyerozyma guilliermondii PGUG_00382 I 0.782
PGUG_00382 Candida guilliermondii PGUG_00382 I 0.782
KLTH0G04686g Lachancea thermotolerans KLTH0G04686g I 0.779
TBLA_0E02960 Tetrapisispora blattae TBLA_0E02960 I 0.779
Kwal_18450 Kluyveromyces waltii Kwal_18450 I 0.779
KLTH0G04686g Kluyveromyces thermotolerans KLTH0G04686g I 0.779
Kpol_1023p80 Vanderwaltozyma polyspora Kpol_1023p80 I 0.777
JL09_g4323 Pichia kudriavzevii JL09_g4323 I 0.772
TPHA_0K00360 Tetrapisispora phaffii TPHA_0K00360 I 0.770
KNAG_0B03460 Kazachstania naganishii KNAG_0B03460 I 0.754
SAKL0G05896g Lachancea kluyveri SAKL0G05896g I 0.753
Ecym_4103 Eremothecium cymbalariae Ecym_4103 I 0.748
Scas_Contig641.12 Saccharomyces castellii Scas_Contig641.12 I 0.748
CLUG_04271 Clavispora lusitaniae CLUG_04271 I 0.748
NCAS_0H02770 Naumovozyma castellii NCAS_0H02770 I 0.748
CLUG_04271 Candida lusitaniae CLUG_04271 I 0.748
BN7_6497 Wickerhamomyces ciferrii BN7_6497 I 0.744
NDAI_0C00850 Naumovozyma dairenensis NDAI_0C00850 I 0.742
AACERI_AaceriAER314W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER314W I 0.736
AGOS_AER314W Ashbya gossypii AGOS_AER314W I 0.736
PNEG_03146 Pneumocystis murina PNEG_03146 I 0.731
PredSwiss_CON591.1 Pneumocystis carinii PredSwiss_CON591.1 I 0.731
HPODL_02118 Ogataea parapolymorpha HPODL_02118 I 0.731
KUCA_T00000773001 Kuraishia capsulata KUCA_T00000773001 I 0.730
GNLVRS01_PISO0N03203g Millerozyma farinosa GNLVRS01_PISO0N03203g I 0.728
DEHA2F22286g Debaryomyces hansenii DEHA2F22286g I 0.728
GNLVRS01_PISO0M03048g Millerozyma farinosa GNLVRS01_PISO0M03048g I 0.728
LELG_05443 Lodderomyces elongisporus LELG_05443 I 0.728
PICST_65833 Scheffersomyces stipitis PICST_65833 I 0.727
CTRG_04888 Candida tropicalis CTRG_04888 I 0.727
estExt_fgenesh1_pm.C_chr_5.10316 Pichia stipitis estExt_fgenesh1_pm.C_chr_5.10316 I 0.727
CD36_70900 Candida dubliniensis CD36_70900 I 0.726
CANTEDRAFT_113041 Candida tenuis CANTEDRAFT_113041 I 0.726
SPAPADRAFT_57590 Spathaspora passalidarum SPAPADRAFT_57590 I 0.726
G210_2310 Candida maltosa G210_2310 I 0.726
CaO19.7017 Candida albicans CaO19.7017 I 0.726
YALI0_E20449g Yarrowia lipolytica YALI0_E20449g I 0.724
PIIN_05295 Piriformospora indica PIIN_05295 I 0.705
TBLA_0D01390 Tetrapisispora blattae TBLA_0D01390 I 0.681
GSTUM_00011138001 Tuber melanosporum GSTUM_00011138001 I 0.677
KLLA0_B01584g Kluyveromyces lactis KLLA0_B01584g I 0.674
fgeneshPB_pg.5__518 Phycomyces blakesleeanus fgeneshPB_pg.5__518 I 0.673
XP_002491722.1 Pichia pastoris XP_002491722.1 I 0.670
gw1.54.52.1 Phycomyces blakesleeanus gw1.54.52.1 I 0.670
PAS_chr2-1_0784 Komagataella pastoris PAS_chr2-1_0784 I 0.670
fgeneshMC_pg.10_#_259 Mucor circinelloides fgeneshMC_pg.10_#_259 I 0.669
RO3G_03673 Rhizopus oryzae RO3G_03673 I 0.669
PLEOSDRAFT_1075550 Pleurotus ostreatus PLEOSDRAFT_1075550 I 0.656
DRE_07453 Drechslerella stenobrocha DRE_07453 I 0.648
SPOG_04875 Schizosaccharomyces cryophilus SPOG_04875 I 0.647
FIBRA_04336 Fibroporia radiculosa FIBRA_04336 I 0.643
H072_1197 Dactylellina haptotyla H072_1197 I 0.642
DACRYDRAFT_108097 Dacryopinax sp DACRYDRAFT_108097 I 0.641
SPPG_01429 Spizellomyces punctatus SPPG_01429 I 0.641
J056_000182 Wallemia ichthyophaga J056_000182 I 0.641
COCVIDRAFT_88516 Bipolaris victoriae COCVIDRAFT_88516 I 0.638
SETTUDRAFT_126230 Setosphaeria turcica SETTUDRAFT_126230 I 0.638
estExt_Genewise1.C_11468 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11468 I 0.638
COCSADRAFT_125307 Bipolaris sorokiniana COCSADRAFT_125307 I 0.638
COCC4DRAFT_127765 Bipolaris maydis COCC4DRAFT_127765 I 0.638
LEMA_P079180.1 Leptosphaeria maculans LEMA_P079180.1 I 0.638
COCMIDRAFT_2266 Bipolaris oryzae COCMIDRAFT_2266 I 0.638
COCCADRAFT_90442 Bipolaris zeicola COCCADRAFT_90442 I 0.638
AOL_s00075g18 Arthrobotrys oligospora AOL_s00075g18 I 0.636
gw1.4.1148.1 Mucor circinelloides gw1.4.1148.1 I 0.636
GMDG_01589 Pseudogymnoascus destructans GMDG_01589 I 0.635
V499_00333 Pseudogymnoascus pannorum V499_00333 I 0.635
AB00260.1 Alternaria brassicicola AB00260.1 I 0.633
EPUS_07220 Endocarpon pusillum EPUS_07220 I 0.630
DOTSEDRAFT_142040 Dothistroma septosporum DOTSEDRAFT_142040 I 0.628
PMAA_076490 Penicillium marneffei PMAA_076490 I 0.627
TSTA_096850 Talaromyces stipitatus TSTA_096850 I 0.627
PMAA_076490 Talaromyces marneffei PMAA_076490 I 0.627
PDE_04931 Penicillium oxalicum PDE_04931 I 0.627
SCHCODRAFT_238623 Schizophyllum commune SCHCODRAFT_238623 I 0.626
BDDG_04023 Blastomyces dermatitidis BDDG_04023 I 0.625
SOCG_04925 Schizosaccharomyces octosporus SOCG_04925 I 0.624
U727_00433932271 Penicillium solitum U727_00433932271 I 0.623
CADANGAG00002342 Aspergillus niger CADANGAG00002342 I 0.623
ACLA_040020 Aspergillus clavatus CADACLAG00003199 I 0.623
CADAFLAG00002414 Aspergillus flavus CADAFLAG00002414 I 0.623
fgenesh1_pm.00866_#_491 Aspergillus carbonarius fgenesh1_pm.00866_#_491 I 0.623
PVAR5_3236 Byssochlamys spectabilis PVAR5_3236 I 0.623
PITC_036250 Penicillium italicum PITC_036250 I 0.623
CADAORAG00001369 Aspergillus oryzae CADAORAG00001369 I 0.623
EURHEDRAFT_516147 Aspergillus ruber EURHEDRAFT_516147 I 0.623
PEX1_077160 Penicillium expansum PEX1_077160 I 0.623
ATEG_04171 Aspergillus terreus CADATEAG00009984 D 0.623
AUEXF2481DRAFT_40998 Aureobasidium subglaciale AUEXF2481DRAFT_40998 I 0.622
M438DRAFT_345498 Aureobasidium pullulans M438DRAFT_345498 I 0.622
M437DRAFT_82573 Aureobasidium melanogenum M437DRAFT_82573 I 0.622
SNOG_10542 Stagonospora nodorum SNOG_10542 I 0.619
SNOG_10542 Phaeosphaeria nodorum SNOG_10542 I 0.619
PDIP_75510 Penicillium digitatum PDIP_75510 I 0.618
MPH_01872 Macrophomina phaseolina MPH_01872 I 0.618
Pc18g00190 Penicillium chrysogenum Pc18g00190 I 0.618
PCH_Pc18g00190 Penicillium rubens PCH_Pc18g00190 I 0.618
BOTBODRAFT_25870 Botryobasidium botryosum BOTBODRAFT_25870 I 0.616
SPPG_04779 Spizellomyces punctatus SPPG_04779 I 0.615
yox1 Schizosaccharomyces pombe SPBC21B10.13c D 0.613
SJAG_01157 Schizosaccharomyces japonicus SJAG_01157 I 0.613
PABG_04211 Paracoccidioides brasiliensis PABG_04211 I 0.613
PAAG_11867 Paracoccidioides sp lutzii PAAG_11867 I 0.613
HCBG_03004 Histoplasma capsulatum HCBG_03004 I 0.613
PSEUBRA_SCAF1g00359 Pseudozyma brasiliensis PSEUBRA_SCAF1g00359 I 0.612
UHOR_00441 Ustilago hordei UHOR_00441 I 0.612
PHSY_003201 Pseudozyma hubeiensis PHSY_003201 I 0.612
sr11633 Sporisorium reilianum sr11633 I 0.612
M407DRAFT_21315 Tulasnella calospora M407DRAFT_21315 I 0.604
MVLG_02993 Microbotryum violaceum MVLG_02993 I 0.603
PaG_01825 Pseudozyma aphidis PaG_01825 I 0.603
PV09_05311 Verruconis gallopava PV09_05311 I 0.602
16304_Multiple Saccharomyces mikatae 16304_Multiple I 0.428