CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AB02715.1
(
Alternaria brassicicola
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
AB02715.1
T230795_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU09556
M02226_2.00
Neurospora crassa
TTAATWTA
TAWATTAA
PBM
Weirauch et al.(2014)
pTH8955
0.840
0.912
Q0UJ27_PHANO_CONSTRUCT
M02202_2.00
PBM CONSTRUCTS
NYAATHWNN
NNWDATTRN
PBM
Weirauch et al.(2014)
pTH6773
0.802
0.965
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB02715.1
Homeodomain
155
212
KMKRFRLTHNQTRFLMSEFARQAHPDAAHRERLAREIPGLSPRQVQVWFQNRRAKLKR
Links
Other
Homeodomain
family TFs
Other
Alternaria brassicicola
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy