CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AB04741.1
(
Alternaria brassicicola
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
AB04741.1
T230797_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_07914
M02132_2.00
Fusarium graminearum
NNKACATGTHN
NDACATGTMNN
PBM
Weirauch et al.(2014)
pTH6329
0.661
0.429
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB04741.1
Homeodomain
187
235
VKVLKDWMLMHIDHPYPTDEDKETLKQQTGLSIGQISNWMANTRRRQKA
Links
Other
Homeodomain
family TFs
Other
Alternaria brassicicola
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy