chr3.CM0282.620.nc (Lotus japonicus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 chr3.CM0282.620.nc T230812_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0282.620.nc Homeodomain 11 76

Links

Other Homeodomain family TFs
Other Lotus japonicus TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA12G18490 Glycine max GLYMA12G18490 N 0.865
MTR_8g061040 Medicago truncatula MTR_8g061040 N 0.864
GLYMA06G35561 Glycine max GLYMA06G35561 N 0.863
Ciclev10008640m.g Citrus clementina Ciclev10008640m.g N 0.849
orange1.1g016887m.g Citrus sinensis orange1.1g016887m.g N 0.849
PRUPE_ppa007389mg Prunus persica PRUPE_ppa007389mg N 0.844
Cucsa.032420 Cucumis sativus Cucsa.032420 N 0.841
Lus10013684.g Linum usitatissimum Lus10013684.g N 0.840
Lus10017944.g Linum usitatissimum Lus10017944.g N 0.837
Gorai.013G172000 Gossypium raimondii Gorai.013G172000 N 0.829
TCM_046875 Theobroma cacao TCM_046875 N 0.825
VIT_19s0014g01880 Vitis vinifera VIT_19s0014g01880 N 0.824
Aquca_052_00043 Aquilegia coerulea Aquca_052_00043 N 0.803
Eucgr.F01181 Eucalyptus grandis Eucgr.F01181 N 0.794
AMTR_s00011p00262800 Amborella trichopoda AMTR_s00011p00262800 N 0.772
chr3.CM0282.640.nc Lotus japonicus chr3.CM0282.640.nc N 0.768
PK03811.1 Cannabis sativa PK03811.1 N 0.763
SapurV1A.0303s0100 Salix purpurea SapurV1A.0303s0100 N 0.763
POPTR_0011s09970 Populus trichocarpa POPTR_0011s09970 N 0.763
SapurV1A.0083s0320 Salix purpurea SapurV1A.0083s0320 N 0.763
gene27205-v1.0-hybrid Fragaria vesca gene27205-v1.0-hybrid N 0.760
Solyc10g007130.2 Solanum lycopersicum Solyc10g007130.2 N 0.757
MDP0000315095 Malus domestica MDP0000315095 N 0.756
MDP0000268133 Malus domestica MDP0000268133 N 0.756
Gorai.002G065900 Gossypium raimondii Gorai.002G065900 N 0.744
MLOC_61712 Hordeum vulgare MLOC_61712 N 0.738
Traes_7DS_197A95728 Triticum aestivum Traes_7DS_197A95728 N 0.738
TRIUR3_19251 Triticum urartu TRIUR3_19251 N 0.738
Bra037587 Brassica rapa Bra037587 N 0.723
Bo1g117640 Brassica oleracea Bo1g117640 N 0.723
OLONG_009306 Oryza longistaminata OLONG_009306 N 0.721
OBART06G15310 Oryza barthii OBART06G15310 N 0.721
OMERI06G16500 Oryza meridionalis OMERI06G16500 N 0.721
OPUNC06G13990 Oryza punctata OPUNC06G13990 N 0.721
LPERR06G11990 Leersia perrieri LPERR06G11990 N 0.721
OS06G0485100 Oryza sativa OS06G0485100 N 0.721
ORUFI06G16210 Oryza rufipogon ORUFI06G16210 N 0.721
BGIOSGA021223 Oryza indica BGIOSGA021223 N 0.721
GSMUA_Achr4G18450_001 Musa acuminata GSMUA_Achr4G18450_001 N 0.717
BRADI1G42040 Brachypodium distachyon BRADI1G42040 N 0.716
30209.m001510 Ricinus communis 30209.m001510 N 0.702
mgf014854m Mimulus guttatus mgf014854m N 0.700
Si030167m.g Setaria italica Si030167m.g N 0.644
Pavir.Bb01334 Panicum virgatum Pavir.Bb01334 N 0.642
Pavir.Ba02980 Panicum virgatum Pavir.Ba02980 N 0.642
Sb02g020940 Sorghum bicolor Sb02g020940 N 0.637
GRMZM2G126170 Zea mays GRMZM2G126170 N 0.636