CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.00866_#_491
(
Aspergillus carbonarius
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
fgenesh1_pm.00866_#_491
T230860_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATEG_04171
M02059_2.00
Aspergillus terreus
BWWATKRNNN
NNNYMATWWV
PBM
Weirauch et al.(2014)
pTH5871
0.862
0.930
YOX1
M00058_2.00
Saccharomyces cerevisiae
HTWAATTR
YAATTWAD
PBM
Badis et al.(2008)
YOX1_2073
0.623
0.456
YOX1
M01552_2.00
Saccharomyces cerevisiae
BWWATDR
YHATWWV
PBM
Zhu et al.(2009)
Yox1
0.623
0.456
YOX1
M07487_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1
0.623
0.456
YOX1
M08575_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
Misc
DeBoer et al.(2011)
YML027W_498
0.623
0.456
NCU03266
M02224_2.00
Neurospora crassa
NNBWWAKDRN
NYHMTWWVNN
PBM
Weirauch et al.(2014)
pTH8814
0.610
0.719
FGRRES_01100
M02131_2.00
Fusarium graminearum
WTTAATTR
YAATTAAW
PBM
Weirauch et al.(2014)
pTH5438
0.609
0.702
YHP1
M02191_2.00
Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN
PBM
Weirauch et al.(2014)
pTH6381
0.601
0.421
YHP1
M08423_2.00
Saccharomyces cerevisiae
TAATTG
CAATTA
ChIP-chip
Mathelier et al.(2014)
MA0426.1
0.601
0.421
YHP1
M08573_2.00
Saccharomyces cerevisiae
WNTAATTR
YAATTANW
Misc
DeBoer et al.(2011)
YDR451C_716
0.601
0.421
YHP1
M10797_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$YHP1_01
0.601
0.421
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.00866_#_491
Homeodomain
59
115
RQKRRRTSPEDHAILESEYQQNPKPDKTARASIVSRVSLGEKEVQIWFQNRRQNDRR
Links
Other
Homeodomain
family TFs
Other
Aspergillus carbonarius
TFs
176 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy