LjSGA_061861.1 (Lotus japonicus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 LjSGA_061861.1 T230902_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.610 0.836
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_061861.1 Homeodomain 134 191

Links

Other Homeodomain family TFs
Other Lotus japonicus TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G161435 Zea mays GRMZM2G161435 I 0.844
OLONG_016371 Oryza longistaminata OLONG_016371 I 0.835
Cucsa.395170 Cucumis sativus Cucsa.395170 N 0.834
Cla023019 Citrullus lanatus Cla023019 N 0.834
gene02674-v1.0-hybrid Fragaria vesca gene02674-v1.0-hybrid N 0.834
evm.TU.supercontig_78.15 Carica papaya evm.TU.supercontig_78.15 N 0.833
OBART11G03800 Oryza barthii OBART11G03800 I 0.811
PK17736.1 Cannabis sativa PK17736.1 N 0.811
POPTR_0002s03240 Populus trichocarpa POPTR_0002s03240 N 0.810
MTR_2g095050 Medicago truncatula MTR_2g095050 N 0.806
SapurV1A.0006s0130 Salix purpurea SapurV1A.0006s0130 N 0.802
GSMUA_Achr4G12180_001 Musa acuminata GSMUA_Achr4G12180_001 N 0.795
evm.TU.supercontig_195.45 Carica papaya evm.TU.supercontig_195.45 N 0.791
Sb04g008030 Sorghum bicolor Sb04g008030 I 0.759
PDK_20s1614221g001 Phoenix dactylifera PDK_20s1614221g001 I 0.750
Ciclev10033544m.g Citrus clementina Ciclev10033544m.g N 0.748
orange1.1g040555m.g Citrus sinensis orange1.1g040555m.g N 0.748
GSMUA_Achr4G02680_001 Musa acuminata GSMUA_Achr4G02680_001 N 0.737
SELMODRAFT_48157 Selaginella moellendorffii SELMODRAFT_48157 N 0.664
SELMODRAFT_68227 Selaginella moellendorffii SELMODRAFT_68227 N 0.664
Thhalv10002247m.g Eutrema salsugineum Thhalv10002247m.g N 0.662
mgf001720m Mimulus guttatus mgf001720m I 0.635
Aquca_001_00106 Aquilegia coerulea Aquca_001_00106 I 0.623
MTR_1g016490 Medicago truncatula MTR_1g016490 I 0.622
TCM_037274 Theobroma cacao TCM_037274 I 0.622
PGSC0003DMG400029946 Solanum tuberosum PGSC0003DMG400029946 I 0.622
POPTR_0006s24680 Populus trichocarpa POPTR_0006s24680 I 0.622
POPTR_0018s05080 Populus trichocarpa POPTR_0018s05080 I 0.622
Solyc08g065420.2 Solanum lycopersicum Solyc08g065420.2 I 0.622
GLYMA17G34811 Glycine max GLYMA17G34811 I 0.622
MDP0000166587 Malus domestica MDP0000166587 I 0.622
Gorai.001G023100 Gossypium raimondii Gorai.001G023100 I 0.622
orange1.1g007660m.g Citrus sinensis orange1.1g007660m.g I 0.622
SapurV1A.0086s0160 Salix purpurea SapurV1A.0086s0160 I 0.622
PDK_20s1374041g001 Phoenix dactylifera PDK_20s1374041g001 I 0.622
SapurV1A.0585s0110 Salix purpurea SapurV1A.0585s0110 I 0.622
ATH1 Vitis vinifera VIT_04s0008g00880 I 0.622
Eucgr.C03024 Eucalyptus grandis Eucgr.C03024 I 0.622
Ca_09180 Cicer arietinum Ca_09180 I 0.622
Ciclev10010212m.g Citrus clementina Ciclev10010212m.g I 0.622
cassava30214.valid.m1 Manihot esculenta cassava30214.valid.m1 I 0.622
GLYMA06G05430 Glycine max GLYMA06G05430 I 0.622
PDK_20s1310391g002 Phoenix dactylifera PDK_20s1310391g002 I 0.621
GSMUA_AchrUn_randomG03720_001 Musa acuminata GSMUA_AchrUn_randomG03720_001 I 0.621
Pm005487 Prunus mume Pm005487 I 0.618
PRUPE_ppa003519mg Prunus persica PRUPE_ppa003519mg I 0.618
ORUFI11G03720 Oryza rufipogon ORUFI11G03720 I 0.612
OS11G0158600 Oryza sativa OS11G0158600 I 0.612
BRADI4G25020 Brachypodium distachyon BRADI4G25020 I 0.612
Bo7g115960 Brassica oleracea Bo7g115960 I 0.610
Bostr.7867s1149 Boechera stricta Bostr.7867s1149 I 0.610
Bo1g008560 Brassica oleracea Bo1g008560 I 0.610
Cagra.4093s0028 Capsella grandiflora Cagra.4093s0028 I 0.610
Bra011403 Brassica rapa Bra011403 I 0.610
ATH1 Arabidopsis lyrata fgenesh2_kg.7__829__AT4G32980.1 I 0.610
Thhalv10025083m.g Eutrema salsugineum Thhalv10025083m.g I 0.610
Carubv10004743m.g Capsella rubella Carubv10004743m.g I 0.610
Bra037031 Brassica rapa Bra037031 I 0.610
ATH1 Arabidopsis thaliana AT4G32980 D 0.610
GRMZM2G333565 Zea mays GRMZM2G333565 I 0.609
Sb10g022210 Sorghum bicolor Sb10g022210 I 0.608
LPERR06G15350 Leersia perrieri LPERR06G15350 I 0.608
OMERI06G18980 Oryza meridionalis OMERI06G18980 I 0.608
BGIOSGA007823 Oryza indica BGIOSGA007823 I 0.608
Pavir.Ab00820 Panicum virgatum Pavir.Ab00820 I 0.608
TRIUR3_30118 Triticum urartu TRIUR3_30118 I 0.608
LPERR02G08020 Leersia perrieri LPERR02G08020 I 0.608
Si006358m.g Setaria italica Si006358m.g I 0.608
F775_25404 Aegilops tauschii F775_25404 I 0.608
BRADI1G37800 Brachypodium distachyon BRADI1G37800 I 0.608
GSMUA_Achr4G04480_001 Musa acuminata GSMUA_Achr4G04480_001 I 0.608
OB06G26180 Oryza brachyantha OB06G26180 I 0.608
Si016883m.g Setaria italica Si016883m.g I 0.608
OBART06G18620 Oryza barthii OBART06G18620 I 0.608
Pavir.Da00778 Panicum virgatum Pavir.Da00778 I 0.608
Pavir.Aa02885 Panicum virgatum Pavir.Aa02885 I 0.608
OPUNC06G16860 Oryza punctata OPUNC06G16860 I 0.608
ORGLA02G0084200 Oryza glaberrima ORGLA02G0084200 I 0.608
Pavir.Db01271 Panicum virgatum Pavir.Db01271 I 0.608
GRMZM2G076272 Zea mays GRMZM2G076272 I 0.608
OPUNC02G08420 Oryza punctata OPUNC02G08420 I 0.608
OMERI02G10650 Oryza meridionalis OMERI02G10650 I 0.608
ONIVA06G22300 Oryza nivara ONIVA06G22300 I 0.608
BGIOSGA021033 Oryza indica BGIOSGA021033 I 0.608
OS02G0226600 Oryza sativa OS02G0226600 I 0.608
ORUFI06G19620 Oryza rufipogon ORUFI06G19620 I 0.608
OS06G0562300 Oryza sativa OS06G0562300 I 0.608
OGLUM06G19730 Oryza glumaepatula OGLUM06G19730 I 0.608
OB12G13660 Oryza brachyantha OB12G13660 N 0.606
MDP0000300503 Malus domestica MDP0000300503 I 0.606
PK22194.1 Cannabis sativa PK22194.1 I 0.602
Eucgr.I01293 Eucalyptus grandis Eucgr.I01293 I 0.599
F775_15470 Aegilops tauschii F775_15470 I 0.599
AMTR_s00030p00173920 Amborella trichopoda AMTR_s00030p00173920 I 0.599
Eucgr.G01703 Eucalyptus grandis Eucgr.G01703 I 0.599
PDK_20s1644411g002 Phoenix dactylifera PDK_20s1644411g002 I 0.599
Aquca_010_00581 Aquilegia coerulea Aquca_010_00581 I 0.599
Ciclev10027952m.g Citrus clementina Ciclev10027952m.g I 0.599
GLYMA02G35450 Glycine max GLYMA02G35450 I 0.599
GLYMA04G01151 Glycine max GLYMA04G01151 I 0.599
MDP0000239684 Malus domestica MDP0000239684 I 0.599
Pavir.Hb01912 Panicum virgatum Pavir.Hb01912 I 0.599
orange1.1g038021m.g Citrus sinensis orange1.1g038021m.g I 0.599
mgf009413m Mimulus guttatus mgf009413m I 0.599
PK19496.1 Cannabis sativa PK19496.1 I 0.599
BGIOSGA010051 Oryza indica BGIOSGA010051 I 0.599
SapurV1A.0670s0090 Salix purpurea SapurV1A.0670s0090 I 0.599
BGIOSGA034459 Oryza indica BGIOSGA034459 I 0.599
MDP0000841379 Malus domestica MDP0000841379 I 0.599
MDP0000248279 Malus domestica MDP0000248279 I 0.599
Lus10000184.g Linum usitatissimum Lus10000184.g I 0.599
Gorai.013G034600 Gossypium raimondii Gorai.013G034600 I 0.599
Gorai.005G246400 Gossypium raimondii Gorai.005G246400 I 0.599
Lus10017481.g Linum usitatissimum Lus10017481.g I 0.599
Lus10028802.g Linum usitatissimum Lus10028802.g I 0.599
BRADI1G12510 Brachypodium distachyon BRADI1G12510 I 0.599
MDP0000128214 Malus domestica MDP0000128214 I 0.599
gene21861-v1.0-hybrid Fragaria vesca gene21861-v1.0-hybrid I 0.599
Ca_14437 Cicer arietinum Ca_14437 I 0.599
MLOC_68213 Hordeum vulgare MLOC_68213 I 0.599
POPTR_0004s16660 Populus trichocarpa POPTR_0004s16660 I 0.599
PGSC0003DMG400030961 Solanum tuberosum PGSC0003DMG400030961 I 0.599
MTR_1g057790 Medicago truncatula MTR_1g057790 I 0.599
OS03G0680800 Oryza sativa OS03G0680800 I 0.599
MLOC_53364 Hordeum vulgare MLOC_53364 I 0.599
POPTR_0009s12360 Populus trichocarpa POPTR_0009s12360 I 0.599
AMTR_s00002p00243900 Amborella trichopoda AMTR_s00002p00243900 I 0.599
PRUPE_ppa002499mg Prunus persica PRUPE_ppa002499mg I 0.599
PRUPE_ppa002158mg Prunus persica PRUPE_ppa002158mg I 0.599
LPERR11G03280 Leersia perrieri LPERR11G03280 I 0.599
ORGLA11G0035300 Oryza glaberrima ORGLA11G0035300 I 0.599
ORGLA03G0273900 Oryza glaberrima ORGLA03G0273900 I 0.599
OGLUM03G29930 Oryza glumaepatula OGLUM03G29930 I 0.599
OB03G36860 Oryza brachyantha OB03G36860 I 0.599
OBART03G29670 Oryza barthii OBART03G29670 I 0.599
OB11G13180 Oryza brachyantha OB11G13180 I 0.599
OGLUM11G03520 Oryza glumaepatula OGLUM11G03520 I 0.599
MTR_7g106320 Medicago truncatula MTR_7g106320 I 0.599
OPUNC03G27020 Oryza punctata OPUNC03G27020 I 0.599
ONIVA11G03780 Oryza nivara ONIVA11G03780 I 0.599
OMERI11G03470 Oryza meridionalis OMERI11G03470 I 0.599
OLONG_026943 Oryza longistaminata OLONG_026943 I 0.599
Sb05g003750 Sorghum bicolor Sb05g003750 I 0.599
LPERR03G24430 Leersia perrieri LPERR03G24430 I 0.599
GRMZM2G458728 Zea mays GRMZM2G458728 I 0.599
GSMUA_Achr10G09410_001 Musa acuminata GSMUA_Achr10G09410_001 I 0.599
Cla016850 Citrullus lanatus Cla016850 I 0.599
GSMUA_Achr1G23300_001 Musa acuminata GSMUA_Achr1G23300_001 I 0.599
Pm021823 Prunus mume Pm021823 I 0.599
Pm026023 Prunus mume Pm026023 I 0.599
Cucsa.109320 Cucumis sativus Cucsa.109320 I 0.599
cassava36014.valid.m1 Manihot esculenta cassava36014.valid.m1 I 0.599
cassava2237.valid.m1 Manihot esculenta cassava2237.valid.m1 I 0.599
30131.m007089 Ricinus communis 30131.m007089 I 0.599
Ca_00859 Cicer arietinum Ca_00859 I 0.599
GSMUA_Achr3G29230_001 Musa acuminata GSMUA_Achr3G29230_001 I 0.599
Traes_4AL_00DB56D41 Triticum aestivum Traes_4AL_00DB56D41 I 0.599
TCM_006827 Theobroma cacao TCM_006827 I 0.599
GSMUA_Achr9G21580_001 Musa acuminata GSMUA_Achr9G21580_001 I 0.599
Si026085m.g Setaria italica Si026085m.g I 0.599
Traes_4BS_20BE06923 Triticum aestivum Traes_4BS_20BE06923 I 0.599
Traes_4BS_5156DD076 Triticum aestivum Traes_4BS_5156DD076 I 0.599
VIT_03s0038g00050 Vitis vinifera VIT_03s0038g00050 I 0.599
TRIUR3_28848 Triticum urartu TRIUR3_28848 I 0.599
Traes_4DS_4BD85B5C7 Triticum aestivum Traes_4DS_4BD85B5C7 I 0.599
GLYMA10G10040 Glycine max GLYMA10G10040 I 0.599
Traes_4DS_35269C392 Triticum aestivum Traes_4DS_35269C392 I 0.599
GLYMA04G05361 Glycine max GLYMA04G05361 I 0.560