TF Information

Minc16020 *(Meloidogyne incognita)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	Minc16020	T230971_2.00	Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
CBG04010 M01242_2.00	Caenorhabditis briggsae	NNKTAATDDMN	NKHHATTAMNN	PBM Lambert et al.(2019) pTH11489	0.795	0.772
ISL2B_ONCTS M10798_2.00	Oncorhynchus tshawytscha	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ISL2_02	0.774	0.719
ISL2B_ONCTS M10799_2.00	Oncorhynchus tshawytscha	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ISL2_03	0.774	0.719
ISL2B_ONCTS M10800_2.00	Oncorhynchus tshawytscha	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ISL2_04	0.774	0.719
ISL2B_ONCTS M10801_2.00	Oncorhynchus tshawytscha	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ISL2_05	0.774	0.719
Isl2 M00458_2.00	Mus musculus	NWDWDNN	NNHWHWN	PBM Berger et al.(2008) Isl2_3430	0.773	0.702
ISL2 M03177_2.00	Homo sapiens	YTAAKTGB	VCAMTTAR	SELEX Jolma et al.(2013) ISL2_1	0.773	0.702
ISL1 M04908_2.00	Homo sapiens	BTAAKTGS	SCAMTTAV	SELEX Yin et al.(2017) ISL1_eDBD_HT-SELEX	0.773	0.702
ISL1 M04910_2.00	Homo sapiens	NTAAKTGS	SCAMTTAN	SELEX Yin et al.(2017) ISL1_FL_HT-SELEX	0.773	0.702
ISL2 M05204_2.00	Homo sapiens	NTAAKTGS	SCAMTTAN	SELEX Yin et al.(2017) ISL2_eDBD_HT-SELEX	0.773	0.702
ISL1 M09128_2.00	Homo sapiens	NYWRAKKGV	BCMMTYWRN	Misc Kulakovskiy et al.(2013) ISL1_HUMAN.H11MO.0.A	0.773	0.702
Isl1 M09209_2.00	Mus musculus	NYWRAKKGV	BCMMTYWRN	Misc Kulakovskiy et al.(2013) ISL1_MOUSE.H11MO.0.A	0.773	0.702
Isl1 M09578_2.00	Mus musculus	YTAAKKGV	BCMMTTAR	Misc Heinz et al.(2010) Neuron-Isl1_GSE31456	0.773	0.702
ISL1 M10634_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ISL1_Q3	0.773	0.702
ISL1 M10635_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ISL1_Q6	0.773	0.702
ISL1 M04909_2.00	Homo sapiens	BTAAKTGS	SCAMTTAV	SELEX Yin et al.(2017) ISL1_eDBD_Methyl-HT-SELEX	0.773	0.702
ISL1 M04911_2.00	Homo sapiens	BTAAKTGS	SCAMTTAV	SELEX Yin et al.(2017) ISL1_FL_Methyl-HT-SELEX	0.773	0.702
ISL2 M05205_2.00	Homo sapiens	NTAAKTGN	NCAMTTAN	SELEX Yin et al.(2017) ISL2_eDBD_Methyl-HT-SELEX	0.773	0.702
tup M06498_2.00	Drosophila melanogaster	WTAATKG	CMATTAW	B1H Mathelier et al.(2014) MA0248.1	0.772	0.702
tup M06270_2.00	Drosophila melanogaster	SWTAATKG	CMATTAWS	B1H Zhu et al.(2011) Tup_Cell_FBgn0003896	0.772	0.702
tup M06271_2.00	Drosophila melanogaster	NYTAATKRV	BYMATTARN	B1H Zhu et al.(2011) tup_SOLEXA_10_FBgn0003896	0.772	0.702
tup M06272_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Tup_SOLEXA_FBgn0003896	0.772	0.702
NEMVEDRAFT_v1g81309 M02152_2.00	Nematostella vectensis	NTAATDNNN	NNNHATTAN	PBM Weirauch et al.(2014) pTH5477	0.652	0.368
PHOX2B M00278_2.00	Homo sapiens	NNNNNRY	RYNNNNN	PBM Barrera et al.(2016) PHOX2B_Q143R	0.632	0.386
NOTO M03241_2.00	Homo sapiens	NNTAATKWRN	NYWMATTANN	SELEX Jolma et al.(2013) NOTO_1	0.622	0.333
NOTO M05390_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) NOTO_eDBD_HT-SELEX	0.622	0.333
NOTO M05391_2.00	Homo sapiens	BTMATKRV	BYMATKAV	SELEX Yin et al.(2017) NOTO_eDBD_Methyl-HT-SELEX	0.622	0.333
VSX1 M00269_2.00	Homo sapiens	NNWAAYNNN	NNNRTTWNN	PBM Barrera et al.(2016) VSX1_REF	0.608	0.386
Vsx1 M00459_2.00	Mus musculus	NNTAATDDN	NHHATTANN	PBM Berger et al.(2008) Vsx1_1728	0.608	0.386
Vsx1 M03267_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Vsx1_1	0.608	0.386
VSX1 M00266_2.00	Homo sapiens	NNTAAYNNN	NNNRTTANN	PBM Barrera et al.(2016) VSX1_G160D	0.608	0.386
VAX2 M00284_2.00	Homo sapiens	NNTAATND	HNATTANN	PBM Barrera et al.(2016) VAX2_REF	0.605	0.333
Vax1 M00398_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Vax1_3499	0.605	0.333
Vax2 M00464_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Vax2_3500	0.605	0.333
VAX2 M03119_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Jolma et al.(2013) VAX2_1	0.605	0.333
VAX2 M05030_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_HT-SELEX	0.605	0.333
Vax1 M10764_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$VAX1_04	0.605	0.333
VAX2 M00283_2.00	Homo sapiens	NNTAAWNDNN	NNHNWTTANN	PBM Barrera et al.(2016) VAX2_L139M	0.605	0.333
VAX2 M05031_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) VAX2_FL_Methyl-HT-SELEX	0.605	0.333
ceh-5 M02179_2.00	Caenorhabditis elegans	NNTAATDDN	NHHATTANN	PBM Weirauch et al.(2014) pTH6562	0.605	0.404
Noto M02101_2.00	Mus musculus	NNHHATDDNN	NNHHATDDNN	PBM Weirauch et al.(2014) pTH6268	0.604	0.316
ISX M00318_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) ISX_R83Q	0.603	0.351
Prop1 M00498_2.00	Mus musculus	NRAKDDN	NHHMTYN	PBM Berger et al.(2008) Prop1_3949	0.602	0.439
Prop1 M09210_2.00	Mus musculus	TAATKRRATTA	TAATYYMATTA	Misc Kulakovskiy et al.(2013) PROP1_MOUSE.H11MO.0.C	0.602	0.439
PROP1 M00317_2.00	Homo sapiens	HAAYNNNNNN	NNNNNNRTTD	PBM Barrera et al.(2016) PROP1_REF	0.602	0.421
PROP1 M03216_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Jolma et al.(2013) PROP1_1	0.602	0.421
PROP1 M03217_2.00	Homo sapiens	TAATKNRRTTA	TAAYYNMATTA	SELEX Jolma et al.(2013) PROP1_2	0.602	0.421
PROP1 M05298_2.00	Homo sapiens	WAATTNNRTTD	HAAYNNAATTW	SELEX Yin et al.(2017) PROP1_eDBD_HT-SELEX	0.602	0.421
PROP1 M05301_2.00	Homo sapiens	TAATTNVATTA	TAATBNAATTA	SELEX Yin et al.(2017) PROP1_FL_HT-SELEX	0.602	0.421
PROP1 M10777_2.00	Sus scrofa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_01	0.602	0.421
PROP1 M10737_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_Q2	0.602	0.421
PROP1 M00315_2.00	Homo sapiens	NNHNATNN	NNATNDNN	PBM Barrera et al.(2016) PROP1_R112Q	0.602	0.421
PROP1 M00316_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) PROP1_R99Q	0.602	0.421
PROP1 M05299_2.00	Homo sapiens	TAATTNVRTTW	WAAYBNAATTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_1	0.602	0.421
PROP1 M05300_2.00	Homo sapiens	TAAYNDCRTTA	TAAYGHNRTTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_2	0.602	0.421
PROP1 M05302_2.00	Homo sapiens	TAATTNVRTTA	TAAYBNAATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_1	0.602	0.421
PROP1 M05303_2.00	Homo sapiens	TAATYRVRTTA	TAAYBYRATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_2	0.602	0.421
PHOX2B M00282_2.00	Homo sapiens	TAATTRRY	RYYAATTA	PBM Barrera et al.(2016) PHOX2B_REF	0.599	0.368
Phox2a M00400_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2a_3947	0.599	0.368
Phox2b M00401_2.00	Mus musculus	NNHAAYNN	NNRTTDNN	PBM Berger et al.(2008) Phox2b_3948	0.599	0.368
PHOX2A M03194_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2A_1	0.599	0.368
PHOX2B M03113_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_1	0.599	0.368
PHOX2B M03114_2.00	Homo sapiens	TAATTRVRTTA	TAAYBYAATTA	SELEX Jolma et al.(2013) PHOX2B_2	0.599	0.368
PHOX2A M05244_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_HT-SELEX	0.599	0.368
PHOX2B M05008_2.00	Homo sapiens	BTAATYRV	BYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_HT-SELEX	0.599	0.368
PHOX2B M05010_2.00	Homo sapiens	TAATTWRATTA	TAATYWAATTA	SELEX Yin et al.(2017) PHOX2B_FL_HT-SELEX	0.599	0.368
Phox2a M09564_2.00	Mus musculus	NTAATBNRATTA	TAATYNVATTAN	Misc Heinz et al.(2010) Neuron-Phox2a_GSE31456	0.599	0.368
PHOX2B M00280_2.00	Homo sapiens	NNNHATAAWTDNN	NNHAWTTATDNNN	PBM Barrera et al.(2016) PHOX2B_R141G	0.599	0.368
PHOX2B M00281_2.00	Homo sapiens	NNNNNNNNRY	RYNNNNNNNN	PBM Barrera et al.(2016) PHOX2B_R141Q	0.599	0.368
PHOX2A M05245_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) PHOX2A_eDBD_Methyl-HT-SELEX	0.599	0.368
PHOX2B M05009_2.00	Homo sapiens	BTAATYRN	NYRATTAV	SELEX Yin et al.(2017) PHOX2B_eDBD_Methyl-HT-SELEX	0.599	0.368
PHOX2B M05011_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Yin et al.(2017) PHOX2B_FL_Methyl-HT-SELEX	0.599	0.368
For this family, TFs with SR scores > 0.599* will likely have a similar motif*