CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1551001g001
(
Phoenix dactylifera
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
PDK_20s1551001g001
T231022_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK25011.1
M01253_2.00
Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN
PBM
Lambert et al.(2019)
pTH11258
0.617
0.719
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1551001g001
Homeodomain
15
71
KTKRKMKTPAQVEALEKFYNEHKYPSELMKLQFAKQIGLSEKQVSGWFCHRRLKDKK
Links
Other
Homeodomain
family TFs
Other
Phoenix dactylifera
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy