XP_002491722.1 (Pichia pastoris)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 XP_002491722.1 T231086_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YHP1
M02191_2.00
Saccharomyces cerevisiae
NWWATKRNN

NNYMATWWN
PBM
Weirauch et al.(2014)
pTH6381
0.698 0.561
YHP1
M08423_2.00
Saccharomyces cerevisiae
TAATTG

CAATTA
ChIP-chip
Mathelier et al.(2014)
MA0426.1
0.698 0.561
YHP1
M08573_2.00
Saccharomyces cerevisiae
WNTAATTR

YAATTANW
Misc
DeBoer et al.(2011)
YDR451C_716
0.698 0.561
YHP1
M10797_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$YHP1_01
0.698 0.561
YOX1
M00058_2.00
Saccharomyces cerevisiae
HTWAATTR

YAATTWAD
PBM
Badis et al.(2008)
YOX1_2073
0.670 0.526
YOX1
M01552_2.00
Saccharomyces cerevisiae
BWWATDR

YHATWWV
PBM
Zhu et al.(2009)
Yox1
0.670 0.526
YOX1
M07487_2.00
Saccharomyces cerevisiae
YTAATTWN

NWAATTAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1
0.670 0.526
YOX1
M08575_2.00
Saccharomyces cerevisiae
YTAATTWN

NWAATTAR
Misc
DeBoer et al.(2011)
YML027W_498
0.670 0.526
yox1
M02174_2.00
Schizosaccharomyces pombe
NNHHATDDNN

NNHHATDDNN
PBM
Weirauch et al.(2014)
pTH6057
0.611 0.421
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002491722.1 Homeodomain 152 208

Links

Other Homeodomain family TFs
Other Pichia pastoris TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PAS_chr2-1_0784 Komagataella pastoris PAS_chr2-1_0784 I 0.867
YALI0_E20449g Yarrowia lipolytica YALI0_E20449g I 0.789
Scas_Contig641.12 Saccharomyces castellii Scas_Contig641.12 I 0.786
NCAS_0H02770 Naumovozyma castellii NCAS_0H02770 I 0.786
AGOS_AER314W Ashbya gossypii AGOS_AER314W I 0.781
AACERI_AaceriAER314W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER314W I 0.781
estExt_fgenesh1_pm.C_chr_5.10316 Pichia stipitis estExt_fgenesh1_pm.C_chr_5.10316 I 0.772
PICST_65833 Scheffersomyces stipitis PICST_65833 I 0.772
NDAI_0C00850 Naumovozyma dairenensis NDAI_0C00850 I 0.771
HPODL_02118 Ogataea parapolymorpha HPODL_02118 I 0.770
CANTEDRAFT_113041 Candida tenuis CANTEDRAFT_113041 I 0.770
G210_2310 Candida maltosa G210_2310 I 0.770
SAKL0G05896g Lachancea kluyveri SAKL0G05896g I 0.767
KUCA_T00000773001 Kuraishia capsulata KUCA_T00000773001 I 0.767
SPAPADRAFT_57590 Spathaspora passalidarum SPAPADRAFT_57590 I 0.767
CD36_70900 Candida dubliniensis CD36_70900 I 0.765
CTRG_04888 Candida tropicalis CTRG_04888 I 0.765
LELG_05443 Lodderomyces elongisporus LELG_05443 I 0.765
CaO19.7017 Candida albicans CaO19.7017 I 0.765
DEHA2F22286g Debaryomyces hansenii DEHA2F22286g I 0.765
GNLVRS01_PISO0M03048g Millerozyma farinosa GNLVRS01_PISO0M03048g I 0.759
GNLVRS01_PISO0N03203g Millerozyma farinosa GNLVRS01_PISO0N03203g I 0.759
KNAG_0B03460 Kazachstania naganishii KNAG_0B03460 I 0.750
CLUG_04271 Candida lusitaniae CLUG_04271 I 0.748
CLUG_04271 Clavispora lusitaniae CLUG_04271 I 0.748
Kwal_18450 Kluyveromyces waltii Kwal_18450 I 0.742
KLTH0G04686g Lachancea thermotolerans KLTH0G04686g I 0.742
KLTH0G04686g Kluyveromyces thermotolerans KLTH0G04686g I 0.742
JL09_g4323 Pichia kudriavzevii JL09_g4323 I 0.736
ZBAI_03698 Zygosaccharomyces bailii ZBAI_03698 I 0.733
ZBAI_09382 Zygosaccharomyces bailii ZBAI_09382 I 0.733
TBLA_0E02960 Tetrapisispora blattae TBLA_0E02960 I 0.731
LALA0_S09e00364g Lachancea lanzarotensis LALA0_S09e00364g I 0.730
CAGL0G07249g Candida glabrata CAGL0G07249g I 0.724
Ecym_4103 Eremothecium cymbalariae Ecym_4103 I 0.722
ZYRO0D13596g Zygosaccharomyces rouxii ZYRO0D13596g I 0.717
CORT_0H00310 Candida orthopsilosis CORT_0H00310 I 0.714
PGUG_00382 Meyerozyma guilliermondii PGUG_00382 I 0.714
CPAG_00635 Candida parapsilosis CPAG_00635 I 0.714
PGUG_00382 Candida guilliermondii PGUG_00382 I 0.714
BN7_6497 Wickerhamomyces ciferrii BN7_6497 I 0.708
Kpol_1004p50 Vanderwaltozyma polyspora Kpol_1004p50 I 0.699
YHP1 Saccharomyces cerevisiae YDR451C D 0.698
SU7_2763 Saccharomyces arboricola SU7_2763 I 0.698
5594_YDR451C Saccharomyces paradoxus 5594_YDR451C I 0.698
SKUD_123402 Saccharomyces kudriavzevii SKUD_123402 I 0.698
5231_YDR451C Saccharomyces mikatae 5231_YDR451C I 0.698
5532_YDR451C Saccharomyces bayanus 5532_YDR451C I 0.698
TPHA_0K00360 Tetrapisispora phaffii TPHA_0K00360 I 0.691
KAFR_0C05600 Kazachstania africana KAFR_0C05600 I 0.690
SPPG_04779 Spizellomyces punctatus SPPG_04779 I 0.690
TPHA_0D02630 Tetrapisispora phaffii TPHA_0D02630 I 0.685
TDEL_0A04320 Torulaspora delbrueckii TDEL_0A04320 I 0.679
KLLA0_B01584g Kluyveromyces lactis KLLA0_B01584g I 0.674
SU7_2475 Saccharomyces arboricola SU7_2475 I 0.670
YOX1 Saccharomyces cerevisiae YML027W D 0.670
17440_YML027W Saccharomyces paradoxus 17440_YML027W I 0.670
SOCG_04925 Schizosaccharomyces octosporus SOCG_04925 I 0.666
GSTUM_00011138001 Tuber melanosporum GSTUM_00011138001 I 0.664
MVLG_02993 Microbotryum violaceum MVLG_02993 I 0.661
M438DRAFT_345498 Aureobasidium pullulans M438DRAFT_345498 I 0.651
M437DRAFT_82573 Aureobasidium melanogenum M437DRAFT_82573 I 0.651
AUEXF2481DRAFT_40998 Aureobasidium subglaciale AUEXF2481DRAFT_40998 I 0.651
RHTO_03185 Rhodosporidium toruloides RHTO_03185 I 0.650
BOTBODRAFT_25870 Botryobasidium botryosum BOTBODRAFT_25870 I 0.650
PV09_05311 Verruconis gallopava PV09_05311 I 0.650
PNEG_03146 Pneumocystis murina PNEG_03146 I 0.647
SPPG_01429 Spizellomyces punctatus SPPG_01429 I 0.647
PIIN_05295 Piriformospora indica PIIN_05295 I 0.647
PredSwiss_CON591.1 Pneumocystis carinii PredSwiss_CON591.1 I 0.647
fgenesh1_pg.C_scaffold_6000346 Sporobolomyces roseus fgenesh1_pg.C_scaffold_6000346 N 0.646
SPOG_04875 Schizosaccharomyces cryophilus SPOG_04875 I 0.643
AOL_s00075g18 Arthrobotrys oligospora AOL_s00075g18 I 0.638
J056_000182 Wallemia ichthyophaga J056_000182 I 0.635
FIBRA_04336 Fibroporia radiculosa FIBRA_04336 I 0.634
DOTSEDRAFT_142040 Dothistroma septosporum DOTSEDRAFT_142040 I 0.625
Kpol_1023p80 Vanderwaltozyma polyspora Kpol_1023p80 I 0.623
PLEOSDRAFT_1075550 Pleurotus ostreatus PLEOSDRAFT_1075550 I 0.619
PHSY_003201 Pseudozyma hubeiensis PHSY_003201 I 0.616
PSEUBRA_SCAF1g00359 Pseudozyma brasiliensis PSEUBRA_SCAF1g00359 I 0.616
sr11633 Sporisorium reilianum sr11633 I 0.616
RO3G_03673 Rhizopus oryzae RO3G_03673 I 0.616
fgeneshMC_pg.10_#_259 Mucor circinelloides fgeneshMC_pg.10_#_259 I 0.616
UHOR_00441 Ustilago hordei UHOR_00441 I 0.616
AMAG_08574 Allomyces macrogynus AMAG_08574 N 0.613
PaG_01825 Pseudozyma aphidis PaG_01825 I 0.612
H072_1197 Dactylellina haptotyla H072_1197 I 0.611
SJAG_01157 Schizosaccharomyces japonicus SJAG_01157 I 0.611
yox1 Schizosaccharomyces pombe SPBC21B10.13c D 0.611
AMAG_09998 Allomyces macrogynus AMAG_09998 N 0.605
gw1.54.52.1 Phycomyces blakesleeanus gw1.54.52.1 I 0.605
DRE_07453 Drechslerella stenobrocha DRE_07453 I 0.604
M407DRAFT_21315 Tulasnella calospora M407DRAFT_21315 I 0.604
DACRYDRAFT_108097 Dacryopinax sp DACRYDRAFT_108097 I 0.600
fgeneshPB_pg.5__518 Phycomyces blakesleeanus fgeneshPB_pg.5__518 I 0.600