ACUA001549 (Anopheles culicifacies)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ACUA001549 T231454_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
scro
M03854_2.00
Drosophila melanogaster
NNBRMGTGB

VCACKYVNN
SELEX
Nitta et al.(2015)
scro_1
0.862 0.982
ceh-24
M02181_2.00
Caenorhabditis elegans
NNRAKWRNN

NNYWMTYNN
PBM
Weirauch et al.(2014)
pTH6327
0.853 0.877
Nkx2-1
M00385_2.00
Mus musculus
NNRAGDRN

NYHCTYNN
PBM
Berger et al.(2008)
Titf1_1722
0.839 0.947
Nkx2-4
M00514_2.00
Mus musculus
NNRAGDRBNN

NNVYHCTYNN
PBM
Berger et al.(2008)
Nkx2-4_3074
0.839 0.947
NKX2-1
M09146_2.00
Homo sapiens
BTKGAGWGBN

NVCWCTCMAV
Misc
Kulakovskiy et al.(2013)
NKX21_HUMAN.H11MO.0.A
0.839 0.947
Nkx2-1
M09171_2.00
Mus musculus
NBTKGAGWGB

VCWCTCMAVN
Misc
Kulakovskiy et al.(2013)
NKX21_MOUSE.H11MO.0.A
0.839 0.947
Nkx2-1
M09563_2.00
Mus musculus
BTBRAGWGBH

DVCWCTYVAV
Misc
Heinz et al.(2010)
LungAC-Nkx2.1_GSE43252
0.839 0.947
NKX2-1
M10694_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TITF1_Q3
0.839 0.947
NKX2-1
M10695_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TTF1_Q5_01
0.839 0.947
NKX2-1
M10696_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TTF1_Q5
0.839 0.947
NKX2-1
M10697_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TTF1_Q6
0.839 0.947
NKX2-5
M00323_2.00
Homo sapiens
NWYAAGTGSNN

NNSCACTTRWN
PBM
Barrera et al.(2016)
NKX2-5_REF
0.803 0.825
Nkx2-5
M00404_2.00
Mus musculus
NNNRAGDRBN

NVYHCTYNNN
PBM
Berger et al.(2008)
Nkx2-5_3436
0.803 0.825
NKX2-5
M05346_2.00
Homo sapiens
BHYAAGTGBN

NVCACTTRDV
SELEX
Yin et al.(2017)
NKX2-5_FL_HT-SELEX
0.803 0.825
Nkx2-5
M02686_2.00
Mus musculus
WTAAKWK

MWMTTAW
SELEX
Mathelier et al.(2014)
MA0063.1
0.803 0.825
Nkx2-5
M08136_2.00
Mus musculus
SYTGAGWGSYH

DRSCWCTCARS
ChIP-seq
Mathelier et al.(2014)
MA0503.1
0.803 0.825
NKX2-5
M09163_2.00
Homo sapiens
BKRAGWGV

BCWCTYMV
Misc
Kulakovskiy et al.(2013)
NKX25_HUMAN.H11MO.0.B
0.803 0.825
Nkx2-5
M09177_2.00
Mus musculus
NBYBRAGTGS

SCACTYVRVN
Misc
Kulakovskiy et al.(2013)
NKX25_MOUSE.H11MO.0.A
0.803 0.825
Nkx2-5
M09567_2.00
Mus musculus
HBRAGWGBNN

NNVCWCTYVD
Misc
Heinz et al.(2010)
HL1-Nkx2.5.biotin_GSE21529
0.803 0.825
NKX2-5
M10742_2.00
Homo sapiens
TYAAGTG

CACTTRA
Transfac
Matys et al.(2006)
V$NKX25_01
0.803 0.825
NKX2-5
M10743_2.00
Homo sapiens
CWTAATTV

BAATTAWG
Transfac
Matys et al.(2006)
V$NKX25_02
0.803 0.825
NKX2-5
M10744_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX25_Q5
0.803 0.825
NKX2-5
M10745_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX25_Q6
0.803 0.825
NKX2-5
M00321_2.00
Homo sapiens
HNAAGTRBNN

NNVYACTTND
PBM
Barrera et al.(2016)
NKX2-5_R161P
0.803 0.825
NKX2-5
M05347_2.00
Homo sapiens
BTYAAGTGGN

NCCACTTRAV
SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_1
0.803 0.825
NKX2-5
M05348_2.00
Homo sapiens
BTYAACGAB

VTCGTTRAV
SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_2
0.803 0.825
NKX2-5
M00322_2.00
Homo sapiens
NNNRNNN

NNNYNNN
PBM
Barrera et al.(2016)
NKX2-5_R190C
0.803 0.807
NKX2-5
M00324_2.00
Homo sapiens
NHNNNNN

NNNNNDN
PBM
Barrera et al.(2016)
NKX2-5_T178M
0.803 0.807
Nkx2-3
M00497_2.00
Mus musculus
NNRAGDRNN

NNYHCTYNN
PBM
Berger et al.(2008)
Nkx2-3_3435
0.801 0.842
NKX2-3
M05042_2.00
Homo sapiens
NNBAAGTGBN

NVCACTTVNN
SELEX
Yin et al.(2017)
NKX2-3_eDBD_HT-SELEX
0.801 0.842
NKX2-3
M05045_2.00
Homo sapiens
BNBAAGTGBN

NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_FL_HT-SELEX
0.801 0.842
NKX2-3
M05043_2.00
Homo sapiens
BNBAAGTGBN

NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_1
0.801 0.842
NKX2-3
M05044_2.00
Homo sapiens
SDYAACGHB

VDCGTTRHS
SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_2
0.801 0.842
NKX2-3
M05046_2.00
Homo sapiens
BNBAAGTGBN

NVCACTTVNV
SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_1
0.801 0.842
NKX2-3
M05047_2.00
Homo sapiens
SWYAACSHB

VDSGTTRWS
SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_2
0.801 0.842
ceh-28
M08210_2.00
Caenorhabditis elegans
AATCGATW

WATCGATT
ChIP-seq
Contrino et al.(2012)
Mw138
0.797 0.719
vnd
M06551_2.00
Drosophila melanogaster
WYTCAAGTR

YACTTGARW
B1H
Mathelier et al.(2014)
MA0253.1
0.794 0.895
vnd
M06377_2.00
Drosophila melanogaster
WYTCAAGTR

YACTTGARW
B1H
Zhu et al.(2011)
Vnd_Cell_FBgn0003986
0.794 0.895
vnd
M06378_2.00
Drosophila melanogaster
KYTSAAGWGY

RCWCTTSARM
B1H
Zhu et al.(2011)
vnd_FlyReg_FBgn0003986
0.794 0.895
vnd
M06379_2.00
Drosophila melanogaster
BTBAAGTR

YACTTVAV
B1H
Zhu et al.(2011)
Vnd_SOLEXA_FBgn0003986
0.794 0.895
vnd
M09683_2.00
Drosophila melanogaster
TCAAGTGB

VCACTTGA
Misc
Kulakovskiy et al.(2009)
vnd
0.794 0.895
Nkx2-2
M00438_2.00
Mus musculus
NNNRAGDRN

NYHCTYNNN
PBM
Berger et al.(2008)
Nkx2-2_2823
0.794 0.877
Nkx2-2
M09190_2.00
Mus musculus
NTBRAGWGBBN

NVVCWCTYVAN
Misc
Kulakovskiy et al.(2013)
NKX22_MOUSE.H11MO.0.A
0.794 0.877
NKX2-2
M10681_2.00
Homo sapiens
WTAAGTRBTT

AAVYACTTAW
Transfac
Matys et al.(2006)
V$NKX22_01
0.794 0.877
NKX2-2
M10682_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX2B_Q3_01
0.794 0.877
NKX2-2
M10683_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX2B_Q3
0.794 0.877
Nkx2-9
M00520_2.00
Mus musculus
NNNRAGDRBN

NVYHCTYNNN
PBM
Berger et al.(2008)
Nkx2-9_3082
0.787 0.807
Nkx2-9
M00800_2.00
Mus musculus
NNRAGDRBNN

NNVYHCTYNN
PBM
Weirauch et al.(2013)
pTH2842
0.787 0.807
Nkx2-9
M09215_2.00
Mus musculus
BTCAAGKRB

VYMCTTGAV
Misc
Kulakovskiy et al.(2013)
NKX28_MOUSE.H11MO.0.C
0.787 0.807
tin
M00559_2.00
Drosophila melanogaster
NWYAAGTGGNN

NNCCACTTRWN
PBM
Busser et al.(2012a)
Tin
0.771 0.649
tin
M03809_2.00
Drosophila melanogaster
BTYAAGTGSN

NSCACTTRAV
SELEX
Nitta et al.(2015)
tin_1
0.771 0.649
tin
M06284_2.00
Drosophila melanogaster
BTYAAGTG

CACTTRAV
B1H
Zhu et al.(2011)
Tin_Cell_FBgn0004110
0.771 0.649
tin
M06285_2.00
Drosophila melanogaster
BCTCAAGTGSVN

NBSCACTTGAGV
B1H
Zhu et al.(2011)
tin_FlyReg_FBgn0004110
0.771 0.649
tin
M06286_2.00
Drosophila melanogaster
BWYAAGTR

YACTTRWV
B1H
Zhu et al.(2011)
Tin_SOLEXA_FBgn0004110
0.771 0.649
tin
M08421_2.00
Drosophila melanogaster
DBTCRAGTGS

SCACTYGAVH
ChIP-chip
Mathelier et al.(2014)
MA0247.2
0.771 0.649
NKX2-5
M00320_2.00
Homo sapiens
NHBAAKWRN

NYWMTTVDN
PBM
Barrera et al.(2016)
NKX2-5_K183E
0.770 0.807
Nkx2-6
M00496_2.00
Mus musculus
HYAAGTRBNN

NNVYACTTRD
PBM
Berger et al.(2008)
Nkx2-6_3437
0.763 0.772
ceh-22
M00376_2.00
Caenorhabditis elegans
WBRAGTRBNN

NNVYACTYVW
PBM
Berger et al.(2006)
Ceh-22
0.761 0.825
NKX2-8
M00302_2.00
Homo sapiens
NNRAGDRB

VYHCTYNN
PBM
Barrera et al.(2016)
NKX2-8_REF
0.755 0.807
NKX2-8
M05149_2.00
Homo sapiens
BTSRAGTGBN

NVCACTYSAV
SELEX
Yin et al.(2017)
NKX2-8_FL_HT-SELEX
0.755 0.807
NKX2-8
M09145_2.00
Homo sapiens
BTCAAGKRB

VYMCTTGAV
Misc
Kulakovskiy et al.(2013)
NKX28_HUMAN.H11MO.0.C
0.755 0.807
NKX2-8
M05150_2.00
Homo sapiens
GCARTAACGACATC

GATGTCGTTAYTGC
SELEX
Yin et al.(2017)
NKX2-8_FL_Methyl-HT-SELEX_1
0.755 0.807
NKX2-8
M05151_2.00
Homo sapiens
BTSAAGTGBN

NVCACTTSAV
SELEX
Yin et al.(2017)
NKX2-8_FL_Methyl-HT-SELEX_2
0.755 0.807
NKX2-8
M05152_2.00
Homo sapiens
BTBAACGAB

VTCGTTVAV
SELEX
Yin et al.(2017)
NKX2-8_FL_Methyl-HT-SELEX_3
0.755 0.807
NKX2-8
M00301_2.00
Homo sapiens
NNRAKDRB

VYHMTYNN
PBM
Barrera et al.(2016)
NKX2-8_A94T
0.755 0.789
Q24782_9CNID
M02206_2.00
Eleutheria dichotoma
TTAATTAA

TTAATTAA
PBM
Weirauch et al.(2014)
pTH5486
0.612 0.509
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACUA001549-PA Homeodomain 39 95

Links

Other Homeodomain family TFs
Other Anopheles culicifacies TFs

832 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL000236 Aedes aegypti AAEL000236 I 0.000
AALB006646 Anopheles albimanus AALB006646 I 0.000
AARA001108 Anopheles arabiensis AARA001108 I 0.000
AATE003062 Anopheles atroparvus AATE003062 I 0.000
ACAC_0000772401 Angiostrongylus cantonensis ACAC_0000772401 I 0.000
ACEP16720 Atta cephalotes ACEP16720 I 0.000
ACHR005020 Anopheles christyi ACHR005020 I 0.000
ACOC_0000013301 Angiostrongylus costaricensis ACOC_0000013301 I 0.000
ACUA020854 Anopheles culicifacies ACUA020854 I 0.000
ACYPI002885 Acyrthosiphon pisum ACYPI002885 I 0.000
ADIR000975 Anopheles dirus ADIR000975 I 0.000
AEPI005796 Anopheles epiroticus AEPI005796 I 0.000
AFAF018179 Anopheles farauti AFAF018179 I 0.000
AFUN011568 Anopheles funestus AFUN011568 I 0.000
AGAP000069 Anopheles gambiae AGAP000069 I 0.000
AMAM011474 Anopheles maculatus AMAM011474 I 0.000
AMEC012184 Anopheles melas AMEC012184 I 0.000
AMEM007373 Anopheles merus AMEM007373 I 0.000
AMIN002134 Anopheles minimus AMIN002134 I 0.000
ANCCAN_30535 Ancylostoma caninum ANCCAN_30535 I 0.000
ANCCEY_07256 Ancylostoma ceylanicum ANCCEY_07256 I 0.000
AQUA008315 Anopheles quadriannulatus AQUA008315 I 0.000
ASIS005525 Anopheles sinensis ASIS005525 I 0.000
ASTEI06209 Anopheles stephensi ASTEI06209 I 0.000
ASU_00906 Ascaris suum ASU_00906 I 0.000
BGIBMGA001488 Bombyx mori BGIBMGA001488 I 0.000
BGLB003447 Biomphalaria glabrata BGLB003447 I 0.000
BTMF_0001614201 Brugia timori BTMF_0001614201 I 0.000
BXY_1193200 Bursaphelenchus xylophilus BXY_1193200 I 0.000
CapteG111555 Capitella teleta CapteG111555 I 0.000
CapteG82802 Capitella teleta CapteG82802 I 0.000
CBG12232 Caenorhabditis briggsae CBG12232 I 0.000
CBN31271 Caenorhabditis brenneri CBN31271 I 0.000
Cflo_07366--XP_001121752.1_APIME Camponotus floridanus Cflo_07366--XP_001121752.1_APIME I 0.000
CGI_10003726 Crassostrea gigas CGI_10003726 I 0.000
CGI_10006159 Crassostrea gigas CGI_10006159 I 0.000
CGOC_0000329701 Cylicostephanus goldi CGOC_0000329701 I 0.000
CLEC001579 Cimex lectularius CLEC001579 I 0.000
CPIJ009525 Culex quinquefasciatus CPIJ009525 I 0.000
CpipJ_CPIJ009525 Culex pipiens CpipJ_CPIJ009525 I 0.000
CRE23967 Caenorhabditis remanei CRE23967 I 0.000
D915_07563 Fasciola hepatica D915_07563 I 0.000
D917_06283 Trichinella nativa D917_06283 I 0.000
D918_04073 Trichuris suis D918_04073 I 0.000
DAPPUDRAFT_50302 Daphnia pulex DAPPUDRAFT_50302 I 0.000
DICVIV_08747 Dictyocaulus viviparus DICVIV_08747 I 0.000
DME_0000296101 Dracunculus medinensis DME_0000296101 I 0.000
ECANG7_08418 Echinococcus canadensis ECANG7_08418 I 0.000
EEL_0000313101 Elaeophora elaphi EEL_0000313101 I 0.000
ENSLOCG00000005947 Lepisosteus oculatus ENSLOCG00000005947 I 0.000
estExt_fgenesh2_kg.C_80001 Branchiostoma floridae estExt_fgenesh2_kg.C_80001 I 0.000
estExt_fgenesh2_pg.C_1200108 Branchiostoma floridae estExt_fgenesh2_pg.C_1200108 I 0.000
e_gw.6.414.1 Branchiostoma floridae e_gw.6.414.1 I 0.000
fd102C Drosophila melanogaster FBgn0039937 D 0.000
fkh-10 Caenorhabditis elegans WBGene00001442 I 0.000
GA10799 Drosophila pseudoobscura FBgn0070855 I 0.000
GB50374 Apis mellifera GB50374 I 0.000
GE14501 Drosophila yakuba FBgn0232105 I 0.000
GF10343 Drosophila ananassae FBgn0087384 I 0.000
GH24005 Drosophila grimshawi FBgn0131461 I 0.000
GI14084 Drosophila mojavensis FBgn0136838 I 0.000
GJ15974 Drosophila virilis FBgn0203160 I 0.000
GK13662 Drosophila willistoni FBgn0215670 I 0.000
GL15611 Drosophila persimilis FBgn0153215 I 0.000
GM26767 Drosophila sechellia FBgn0181620 I 0.000
GPUH_0002128801 Gongylonema pulchrum GPUH_0002128801 I 0.000
HCOI02176800 Haemonchus contortus HCOI02176800 I 0.000
HDID_0000955901 Hymenolepis diminuta HDID_0000955901 I 0.000
HelroG146879 Helobdella robusta HelroG146879 I 0.000
HelroG84905 Helobdella robusta HelroG84905 I 0.000
HMEL012130 Heliconius melpomene HMEL012130 I 0.000
HmN_000125600 Hymenolepis microstoma HmN_000125600 I 0.000
HNAJ_0000218001 Hymenolepis nana HNAJ_0000218001 I 0.000
HPBE_0001940301 Heligmosomoides bakeri HPBE_0001940301 I 0.000
HPLM_0001940801 Haemonchus placei HPLM_0001940801 I 0.000
Hsal_00505--XP_001121752.1_APIME Harpegnathos saltator Hsal_00505--XP_001121752.1_APIME I 0.000
ISCW003951 Ixodes scapularis ISCW003951 I 0.000
KGM_06490 Danaus plexippus KGM_06490 I 0.000
L596_g8980 Steinernema carpocapsae L596_g8980 I 0.000
L889_g23699 Steinernema feltiae L889_g23699 I 0.000
L892_g5229 Steinernema scapterisci L892_g5229 I 0.000
L893_g32272 Steinernema glaseri L893_g32272 I 0.000
L898_g16488 Steinernema monticolum L898_g16488 I 0.000
LCUP005975 Lucilia cuprina LCUP005975 I 0.000
LDEC001528 Leptinotarsa decemlineata LDEC001528 I 0.000
LLOJ007413 Lutzomyia longipalpis LLOJ007413 I 0.000
LotgiG69928 Lottia gigantea LotgiG69928 I 0.000
LotgiG79770 Lottia gigantea LotgiG79770 I 0.000
LotgiG79781 Lottia gigantea LotgiG79781 I 0.000
LotgiG99434 Lottia gigantea LotgiG99434 I 0.000
MESCA005623 Megaselia scalaris MESCA005623 I 0.000
NBR_0000095001 Nippostrongylus brasiliensis NBR_0000095001 I 0.000
nDi.2.2.2.g05283 Dirofilaria immitis nDi.2.2.2.g05283 I 0.000
NECAME_04384 Necator americanus NECAME_04384 I 0.000
NEMVEDRAFT_v1g125256 Nematostella vectensis NEMVEDRAFT_v1g125256 I 0.000
NEMVEDRAFT_v1g39596 Nematostella vectensis NEMVEDRAFT_v1g39596 I 0.000
NEMVEDRAFT_v1g59063 Nematostella vectensis NEMVEDRAFT_v1g59063 I 0.000
nOo.2.0.1.g07936 Onchocerca ochengi nOo.2.0.1.g07936 I 0.000
NV18839 Nasonia vitripennis NV18839 I 0.000
Ocbimv22038677m.g Octopus bimaculoides Ocbimv22038677m.g I 0.000
OESDEN_02306 Oesophagostomum dentatum OESDEN_02306 I 0.000
PHUM244390 Pediculus humanus PHUM244390 I 0.000
PPAI000826 Phlebotomus papatasi PPAI000826 I 0.000
RPRC002475 Rhodnius prolixus RPRC002475 I 0.000
Sakowv30023329m.g Saccoglossus kowalevskii Sakowv30023329m.g I 0.000
Sakowv30023336m.g Saccoglossus kowalevskii Sakowv30023336m.g I 0.000
SBAD_0000682701 Soboliphyme baturini SBAD_0000682701 I 0.000
SINV17382 Solenopsis invicta SINV17382 I 0.000
SMAR012448 Strigamia maritima SMAR012448 I 0.000
SMU15004452 Schmidtea mediterranea SMU15004452 I 0.000
SVUK_0000095001 Strongylus vulgaris SVUK_0000095001 I 0.000
TC004761 Tribolium castaneum TC004761 I 0.000
TCLT_0000158601 Thelazia callipaeda TCLT_0000158601 I 0.000
TCNE_0000717001 Toxocara canis TCNE_0000717001 I 0.000
tetur01g09690 Tetranychus urticae tetur01g09690 I 0.000
TMUE_s0045003300 Trichuris muris TMUE_s0045003300 I 0.000
TTAC_0000212301 Hydatigera taeniaeformis TTAC_0000212301 I 0.000
TTRE_0000002201 Trichuris trichiura TTRE_0000002201 I 0.000
WBGene00238063 Onchocerca volvulus WBGene00238063 I 0.000
WUBG_10187 Wuchereria bancrofti WUBG_10187 I 0.000
XP_002159677.1 Hydra magnipapillata XP_002159677.1 I 0.000
YQE_09099 Dendroctonus ponderosae YQE_09099 I 0.000