CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf17864-processed-gene-0.0
(
Meloidogyne floridensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
augustus_masked-nMf.1.1.scaf17864-processed-gene-0.0
T233196_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf17864-processed-gene-0.0-mRNA-1
Homeodomain
1
14
VSNWFGNKRIRYRK
Links
Other
Homeodomain
family TFs
Other
Meloidogyne floridensis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
D915_05490
Fasciola hepatica
D915_05490
N
0.867
SPER_0001328101
Spirometra erinaceieuropaei
SPER_0001328101
N
0.792
SPER_0000219001
Spirometra erinaceieuropaei
SPER_0000219001
N
0.757
ALUE_0000265801
Ascaris lumbricoides
ALUE_0000265801
N
0.695
LLOJ008226
Lutzomyia longipalpis
LLOJ008226
N
0.690
ENSAMXG00000009040
Astyanax mexicanus
ENSAMXG00000009040
N
0.682
Minc11665
Meloidogyne incognita
Minc11665
I
0.387
Minc15321
Meloidogyne incognita
Minc15321
I
0.387