CGOC_0000645001 (Cylicostephanus goldi)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 CGOC_0000645001 T233327_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARGFX
M05369_2.00
Homo sapiens
NYTAATTARH

DYTAATTARN
SELEX
Yin et al.(2017)
ARGFX_eDBD_HT-SELEX_1
0.605 0.315
ARGFX
M05370_2.00
Homo sapiens
HTAATYTAATTAR

YTAATTARATTAD
SELEX
Yin et al.(2017)
ARGFX_eDBD_HT-SELEX_2
0.605 0.315
ARGFX
M05371_2.00
Homo sapiens
NYTAATTAGH

DCTAATTARN
SELEX
Yin et al.(2017)
ARGFX_eDBD_Methyl-HT-SELEX_1
0.605 0.315
ARGFX
M05372_2.00
Homo sapiens
HTAATYTAATTAR

YTAATTARATTAD
SELEX
Yin et al.(2017)
ARGFX_eDBD_Methyl-HT-SELEX_2
0.605 0.315
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CGOC_0000645001-mRNA-1 Homeodomain 176 229

Links

Other Homeodomain family TFs
Other Cylicostephanus goldi TFs

Invalid Input OrderBy

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action