DICVIV_07123 (Dictyocaulus viviparus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 DICVIV_07123 T233607_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG04010
M01242_2.00
Caenorhabditis briggsae
NNKTAATDDMN

NKHHATTAMNN
PBM
Lambert et al.(2019)
pTH11489
0.858 0.860
Isl2
M00458_2.00
Mus musculus
NWDWDNN

NNHWHWN
PBM
Berger et al.(2008)
Isl2_3430
0.834 0.807
ISL2
M03177_2.00
Homo sapiens
YTAAKTGB

VCAMTTAR
SELEX
Jolma et al.(2013)
ISL2_1
0.834 0.807
ISL1
M04908_2.00
Homo sapiens
BTAAKTGS

SCAMTTAV
SELEX
Yin et al.(2017)
ISL1_eDBD_HT-SELEX
0.834 0.807
ISL1
M04910_2.00
Homo sapiens
NTAAKTGS

SCAMTTAN
SELEX
Yin et al.(2017)
ISL1_FL_HT-SELEX
0.834 0.807
ISL2
M05204_2.00
Homo sapiens
NTAAKTGS

SCAMTTAN
SELEX
Yin et al.(2017)
ISL2_eDBD_HT-SELEX
0.834 0.807
ISL1
M09128_2.00
Homo sapiens
NYWRAKKGV

BCMMTYWRN
Misc
Kulakovskiy et al.(2013)
ISL1_HUMAN.H11MO.0.A
0.834 0.807
Isl1
M09209_2.00
Mus musculus
NYWRAKKGV

BCMMTYWRN
Misc
Kulakovskiy et al.(2013)
ISL1_MOUSE.H11MO.0.A
0.834 0.807
Isl1
M09578_2.00
Mus musculus
YTAAKKGV

BCMMTTAR
Misc
Heinz et al.(2010)
Neuron-Isl1_GSE31456
0.834 0.807
ISL1
M10634_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL1_Q3
0.834 0.807
ISL1
M10635_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL1_Q6
0.834 0.807
ISL1
M04909_2.00
Homo sapiens
BTAAKTGS

SCAMTTAV
SELEX
Yin et al.(2017)
ISL1_eDBD_Methyl-HT-SELEX
0.834 0.807
ISL1
M04911_2.00
Homo sapiens
BTAAKTGS

SCAMTTAV
SELEX
Yin et al.(2017)
ISL1_FL_Methyl-HT-SELEX
0.834 0.807
ISL2
M05205_2.00
Homo sapiens
NTAAKTGN

NCAMTTAN
SELEX
Yin et al.(2017)
ISL2_eDBD_Methyl-HT-SELEX
0.834 0.807
tup
M06498_2.00
Drosophila melanogaster
WTAATKG

CMATTAW
B1H
Mathelier et al.(2014)
MA0248.1
0.833 0.789
tup
M06270_2.00
Drosophila melanogaster
SWTAATKG

CMATTAWS
B1H
Zhu et al.(2011)
Tup_Cell_FBgn0003896
0.833 0.789
tup
M06271_2.00
Drosophila melanogaster
NYTAATKRV

BYMATTARN
B1H
Zhu et al.(2011)
tup_SOLEXA_10_FBgn0003896
0.833 0.789
tup
M06272_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Tup_SOLEXA_FBgn0003896
0.833 0.789
ISL2B_ONCTS
M10798_2.00
Oncorhynchus tshawytscha Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL2_02
0.833 0.789
ISL2B_ONCTS
M10799_2.00
Oncorhynchus tshawytscha Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL2_03
0.833 0.789
ISL2B_ONCTS
M10800_2.00
Oncorhynchus tshawytscha Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL2_04
0.833 0.789
ISL2B_ONCTS
M10801_2.00
Oncorhynchus tshawytscha Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL2_05
0.833 0.789
NEMVEDRAFT_v1g81309
M02152_2.00
Nematostella vectensis
NTAATDNNN

NNNHATTAN
PBM
Weirauch et al.(2014)
pTH5477
0.636 0.333
NOTO
M03241_2.00
Homo sapiens
NNTAATKWRN

NYWMATTANN
SELEX
Jolma et al.(2013)
NOTO_1
0.631 0.386
NOTO
M05390_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
NOTO_eDBD_HT-SELEX
0.631 0.386
NOTO
M05391_2.00
Homo sapiens
BTMATKRV

BYMATKAV
SELEX
Yin et al.(2017)
NOTO_eDBD_Methyl-HT-SELEX
0.631 0.386
PHOX2B
M00278_2.00
Homo sapiens
NNNNNRY

RYNNNNN
PBM
Barrera et al.(2016)
PHOX2B_Q143R
0.623 0.368
Noto
M02101_2.00
Mus musculus
NNHHATDDNN

NNHHATDDNN
PBM
Weirauch et al.(2014)
pTH6268
0.613 0.368
VSX1
M00269_2.00
Homo sapiens
NNWAAYNNN

NNNRTTWNN
PBM
Barrera et al.(2016)
VSX1_REF
0.608 0.421
Vsx1
M00459_2.00
Mus musculus
NNTAATDDN

NHHATTANN
PBM
Berger et al.(2008)
Vsx1_1728
0.608 0.421
Vsx1
M03267_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Vsx1_1
0.608 0.421
VSX1
M00266_2.00
Homo sapiens
NNTAAYNNN

NNNRTTANN
PBM
Barrera et al.(2016)
VSX1_G160D
0.608 0.421
ceh-5
M02179_2.00
Caenorhabditis elegans
NNTAATDDN

NHHATTANN
PBM
Weirauch et al.(2014)
pTH6562
0.602 0.333
SHOX
M02095_2.00
Homo sapiens
NTAATTRN

NYAATTAN
PBM
Weirauch et al.(2014)
pTH5805
0.599 0.351
Shox2
M00439_2.00
Mus musculus
NTAATDDN

NHHATTAN
PBM
Berger et al.(2008)
Shox2_2641
0.599 0.351
SHOX
M03232_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
SHOX_1
0.599 0.351
SHOX2
M03204_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Jolma et al.(2013)
SHOX2_1
0.599 0.351
Shox2
M03263_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Shox2_1
0.599 0.351
CG5369
M03876_2.00
Drosophila melanogaster
TAATTHVATTA

TAATBDAATTA
SELEX
Nitta et al.(2015)
CG5369_1
0.599 0.351
CG5369
M03877_2.00
Drosophila melanogaster
TAATTRNNTAATBN

NVATTANNYAATTA
SELEX
Nitta et al.(2015)
CG5369_2
0.599 0.351
CG5369
M03878_2.00
Drosophila melanogaster
TAATTVRATWA

TWATYBAATTA
SELEX
Nitta et al.(2015)
CG5369_3
0.599 0.351
SHOX
M05366_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_HT-SELEX
0.599 0.351
Shox2
M10772_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SHOX2_05
0.599 0.351
SHOX
M05367_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_1
0.599 0.351
SHOX
M05368_2.00
Homo sapiens
NTAAYGAN

NTCRTTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_2
0.599 0.351
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
DICVIV_07123 Homeodomain 198 274

Links

Other Homeodomain family TFs
Other Dictyocaulus viviparus TFs

556 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAB34088 Xenopus laevis AAB34088 I 0.000
AAK54135 Xenopus tropicalis AAK54135 I 0.000
AAK54137 Xenopus laevis AAK54137 I 0.000
AAK54139 Xenopus laevis AAK54139 I 0.000
Aan_R012932 Calypte anna Aan_R012932 I 0.000
ACEP13085 Atta cephalotes ACEP13085 I 0.000
Afo_R005870 Aptenodytes forsteri Afo_R005870 I 0.000
Alligator_sinensis_CCG016283.1 Alligator sinensis Alligator_sinensis_CCG016283.1 I 0.000
BGIBMGA006230 Bombyx mori BGIBMGA006230 I 0.000
Brh_R006038 Buceros rhinoceros Brh_R006038 I 0.000
CapteG76255 Capitella teleta CapteG76255 I 0.000
Cflo_07707--XP_393944.1_APIME Camponotus floridanus Cflo_07707--XP_393944.1_APIME I 0.000
CGI_10027813 Crassostrea gigas CGI_10027813 I 0.000
CLEC007039 Cimex lectularius CLEC007039 I 0.000
ENSAMEG00000009606 Ailuropoda melanoleuca ENSAMEG00000009606 I 0.000
ENSAMXG00000011013 Astyanax mexicanus ENSAMXG00000011013 I 0.000
ENSAPLG00000003920 Anas platyrhynchos ENSAPLG00000003920 I 0.000
ENSCPOG00000014827 Cavia porcellus ENSCPOG00000014827 I 0.000
ENSCSAG00000014787 Chlorocebus sabaeus ENSCSAG00000014787 I 0.000
ENSFALG00000005762 Ficedula albicollis ENSFALG00000005762 I 0.000
ENSGALG00000015241 Gallus gallus ENSGALG00000015241 I 0.000
ENSLACG00000005413 Latimeria chalumnae ENSLACG00000005413 I 0.000
ENSMEUG00000009510 Macropus eugenii ENSMEUG00000009510 I 0.000
ENSMPUG00000010793 Mustela putorius furo ENSMPUG00000010793 I 0.000
ENSNLEG00000013421 Nomascus leucogenys ENSNLEG00000013421 I 0.000
ENSOARG00000013030 Ovis aries ENSOARG00000013030 I 0.000
ENSP00000020945-D1 Bos grunniens ENSP00000020945-D1 I 0.000
ENSP00000380034 Macaca fascicularis ENSP00000380034 I 0.000
ENSPANG00000017540 Papio anubis ENSPANG00000017540 I 0.000
ENSPPYG00000018578 Pongo abelii ENSPPYG00000018578 I 0.000
ENSPSIG00000016395 Pelodiscus sinensis ENSPSIG00000016395 I 0.000
ENSSHAG00000004205 Sarcophilus harrisii ENSSHAG00000004205 I 0.000
ENSSSCG00000024404 Sus scrofa ENSSSCG00000024404 I 0.000
ENSSSCG00000026570 Sus scrofa ENSSSCG00000026570 I 0.000
ENSSTOG00000028743 Ictidomys tridecemlineatus ENSSTOG00000028743 I 0.000
esg Drosophila melanogaster FBgn0001981 D 0.000
estExt_fgenesh2_kg.C_190001 Branchiostoma floridae estExt_fgenesh2_kg.C_190001 I 0.000
GA17666 Drosophila pseudoobscura FBgn0077676 I 0.000
GA17994 Drosophila pseudoobscura FBgn0078003 I 0.000
GD21956 Drosophila simulans FBgn0193371 I 0.000
GD24004 Drosophila simulans FBgn0195364 I 0.000
GE19402 Drosophila yakuba FBgn0236745 I 0.000
GF14525 Drosophila ananassae FBgn0091552 I 0.000
GF15382 Drosophila ananassae FBgn0092407 I 0.000
Gfo_R012649 Geospiza fortis Gfo_R012649 I 0.000
GG24207 Drosophila erecta FBgn0116339 I 0.000
GG25158 Drosophila erecta FBgn0117283 I 0.000
GH13119 Drosophila grimshawi FBgn0120596 I 0.000
GH13754 Drosophila grimshawi FBgn0121230 I 0.000
GI17894 Drosophila mojavensis FBgn0140635 I 0.000
GI22651 Drosophila mojavensis FBgn0145379 I 0.000
GJ17399 Drosophila virilis FBgn0204571 I 0.000
GJ23203 Drosophila virilis FBgn0210305 I 0.000
GK18133 Drosophila willistoni FBgn0220132 I 0.000
GK18253 Drosophila willistoni FBgn0220252 I 0.000
GL26425 Drosophila persimilis FBgn0164007 I 0.000
GL26594 Drosophila persimilis FBgn0164176 I 0.000
GM14357 Drosophila sechellia FBgn0169282 I 0.000
HHAL006775-PA Halyomorpha halys HHAL006775-PA I 0.000
HMEL002306 Heliconius melpomene HMEL002306 I 0.000
KGM_17970 Danaus plexippus KGM_17970 I 0.000
L798_10614 Zootermopsis nevadensis L798_10614 I 0.000
LCUP006862 Lucilia cuprina LCUP006862 I 0.000
LCUP013268 Lucilia cuprina LCUP013268 I 0.000
LDEC001157 Leptinotarsa decemlineata LDEC001157 I 0.000
LotgiG114290 Lottia gigantea LotgiG114290 I 0.000
MCINX001355 Melitaea cinxia MCINX001355 I 0.000
MDOA006149 Musca domestica MDOA006149 I 0.000
MDOA014024 Musca domestica MDOA014024 I 0.000
Myotis_brandtii_Snai2_10018131 Myotis brandtii Myotis_brandtii_Snai2_10018131 I 0.000
NV17743 Nasonia vitripennis NV17743 I 0.000
Ogr04681 Ophisaurus gracilis Ogr04681 I 0.000
PHUM091060 Pediculus humanus PHUM091060 I 0.000
PPAI008011 Phlebotomus papatasi PPAI008011 I 0.000
Pvit_15376 Pogona vitticeps Pvit_15376 I 0.000
RPRC005707 Rhodnius prolixus RPRC005707 I 0.000
Sakowv30043351m.g Saccoglossus kowalevskii Sakowv30043351m.g I 0.000
SINV14155 Solenopsis invicta SINV14155 I 0.000
SMAR001314 Strigamia maritima SMAR001314 I 0.000
SMAR001730 Strigamia maritima SMAR001730 I 0.000
SNAI2 Choloepus hoffmanni ENSCHOG00000007046 I 0.000
SNAI2 Felis catus ENSFCAG00000015779 I 0.000
SNAI2 Anolis carolinensis ENSACAG00000012332 I 0.000
SNAI2 Bos taurus ENSBTAG00000013227 I 0.000
SNAI2 Canis familiaris ENSCAFG00000006638 I 0.000
SNAI2 Equus caballus ENSECAG00000010120 I 0.000
SNAI2 Otolemur garnettii ENSOGAG00000010500 I 0.000
SNAI2 Dasypus novemcinctus ENSDNOG00000035997 I 0.000
SNAI2 Callithrix jacchus ENSCJAG00000013499 I 0.000
snai2 Xenopus tropicalis XB-GENE-487371 I 0.000
SNAI2 Homo sapiens ENSG00000019549 D 0.000
snai2 Gasterosteus aculeatus ENSGACG00000017935 I 0.000
SNAI2 Monodelphis domestica ENSMODG00000010173 I 0.000
Snai2 Mus musculus ENSMUSG00000022676 D 0.000
SNAI2 Ornithorhynchus anatinus ENSOANG00000007267 I 0.000
SNAI2 Oryctolagus cuniculus ENSOCUG00000012254 I 0.000
SNAI2 Procavia capensis ENSPCAG00000001788 I 0.000
SNAI2 Pan troglodytes ENSPTRG00000020235 I 0.000
SNAI2 Pteropus vampyrus ENSPVAG00000009457 I 0.000
SNAI2 Taeniopygia guttata ENSTGUG00000010914 I 0.000
SNAI2 Macaca mulatta ENSMMUG00000016195 I 0.000
Snai2 Rattus norvegicus ENSRNOG00000047699 I 0.000
SNAI2 Meleagris gallopavo ENSMGAG00000010813 I 0.000
SNAI2 Gorilla gorilla ENSGGOG00000000959 I 0.000
SNAI2 Loxodonta africana ENSLAFG00000009299 I 0.000
SNAI2 Myotis lucifugus ENSMLUG00000001086 I 0.000
SNAI2 Microcebus murinus ENSMICG00000000335 I 0.000
snai2.L Xenopus laevis XB-GENE-6255814 I 0.000
snai2.S Xenopus laevis XB-GENE-865699 I 0.000
Tal_R003673 Tyto alba Tal_R003673 I 0.000
TC014474 Tribolium castaneum TC014474 I 0.000
tetur13g00760 Tetranychus urticae tetur13g00760 I 0.000
wor Drosophila melanogaster FBgn0001983 D 0.000
YQE_07640 Dendroctonus ponderosae YQE_07640 I 0.000