CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GPLIN_000208700
(
Globodera pallida
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
GPLIN_000208700
T234018_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000208700
Homeodomain
107
148
MRFSRDQLDMLERKYWTHQYLALPERAELAYEIGVAEWNVKV
Links
Other
Homeodomain
family TFs
Other
Globodera pallida
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_07067
Ancylostoma ceylanicum
ANCCEY_07067
N
0.634
ENSXMAG00000019975
Xiphophorus maculatus
ENSXMAG00000019975
N
0.628
ENSMMUG00000032301
Macaca mulatta
ENSMMUG00000032301
I
0.624
ENSETEG00000007628
Echinops telfairi
ENSETEG00000007628
I
0.624
ENSMMUG00000030441
Macaca mulatta
ENSMMUG00000030441
I
0.624
SNAPOd2T00000484001
Oikopleura dioica
SNAPOd2T00000484001
N
0.612
BGLB009356
Biomphalaria glabrata
BGLB009356
N
0.609
lhx3.L
Xenopus laevis
XB-GENE-865930
I
0.602