TF Information

GPLIN_001387100 *(Globodera pallida)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	GPLIN_001387100	T234073_2.00	WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
CBG04010 M01242_2.00	Caenorhabditis briggsae	NNKTAATDDMN	NKHHATTAMNN	PBM Lambert et al.(2019) pTH11489	0.815	0.807
Isl2 M00458_2.00	Mus musculus	NWDWDNN	NNHWHWN	PBM Berger et al.(2008) Isl2_3430	0.793	0.737
ISL2 M03177_2.00	Homo sapiens	YTAAKTGB	VCAMTTAR	SELEX Jolma et al.(2013) ISL2_1	0.793	0.737
ISL1 M04908_2.00	Homo sapiens	BTAAKTGS	SCAMTTAV	SELEX Yin et al.(2017) ISL1_eDBD_HT-SELEX	0.793	0.737
ISL1 M04910_2.00	Homo sapiens	NTAAKTGS	SCAMTTAN	SELEX Yin et al.(2017) ISL1_FL_HT-SELEX	0.793	0.737
ISL2 M05204_2.00	Homo sapiens	NTAAKTGS	SCAMTTAN	SELEX Yin et al.(2017) ISL2_eDBD_HT-SELEX	0.793	0.737
ISL1 M09128_2.00	Homo sapiens	NYWRAKKGV	BCMMTYWRN	Misc Kulakovskiy et al.(2013) ISL1_HUMAN.H11MO.0.A	0.793	0.737
Isl1 M09209_2.00	Mus musculus	NYWRAKKGV	BCMMTYWRN	Misc Kulakovskiy et al.(2013) ISL1_MOUSE.H11MO.0.A	0.793	0.737
Isl1 M09578_2.00	Mus musculus	YTAAKKGV	BCMMTTAR	Misc Heinz et al.(2010) Neuron-Isl1_GSE31456	0.793	0.737
ISL1 M10634_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ISL1_Q3	0.793	0.737
ISL1 M10635_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ISL1_Q6	0.793	0.737
ISL2B_ONCTS M10798_2.00	Oncorhynchus tshawytscha	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ISL2_02	0.793	0.737
ISL2B_ONCTS M10799_2.00	Oncorhynchus tshawytscha	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ISL2_03	0.793	0.737
ISL2B_ONCTS M10800_2.00	Oncorhynchus tshawytscha	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ISL2_04	0.793	0.737
ISL2B_ONCTS M10801_2.00	Oncorhynchus tshawytscha	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ISL2_05	0.793	0.737
ISL1 M04909_2.00	Homo sapiens	BTAAKTGS	SCAMTTAV	SELEX Yin et al.(2017) ISL1_eDBD_Methyl-HT-SELEX	0.793	0.737
ISL1 M04911_2.00	Homo sapiens	BTAAKTGS	SCAMTTAV	SELEX Yin et al.(2017) ISL1_FL_Methyl-HT-SELEX	0.793	0.737
ISL2 M05205_2.00	Homo sapiens	NTAAKTGN	NCAMTTAN	SELEX Yin et al.(2017) ISL2_eDBD_Methyl-HT-SELEX	0.793	0.737
tup M06498_2.00	Drosophila melanogaster	WTAATKG	CMATTAW	B1H Mathelier et al.(2014) MA0248.1	0.791	0.719
tup M06270_2.00	Drosophila melanogaster	SWTAATKG	CMATTAWS	B1H Zhu et al.(2011) Tup_Cell_FBgn0003896	0.791	0.719
tup M06271_2.00	Drosophila melanogaster	NYTAATKRV	BYMATTARN	B1H Zhu et al.(2011) tup_SOLEXA_10_FBgn0003896	0.791	0.719
tup M06272_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Tup_SOLEXA_FBgn0003896	0.791	0.719
NEMVEDRAFT_v1g81309 M02152_2.00	Nematostella vectensis	NTAATDNNN	NNNHATTAN	PBM Weirauch et al.(2014) pTH5477	0.644	0.351
NOTO M03241_2.00	Homo sapiens	NNTAATKWRN	NYWMATTANN	SELEX Jolma et al.(2013) NOTO_1	0.630	0.351
NOTO M05390_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) NOTO_eDBD_HT-SELEX	0.630	0.351
NOTO M05391_2.00	Homo sapiens	BTMATKRV	BYMATKAV	SELEX Yin et al.(2017) NOTO_eDBD_Methyl-HT-SELEX	0.630	0.351
PHOX2B M00278_2.00	Homo sapiens	NNNNNRY	RYNNNNN	PBM Barrera et al.(2016) PHOX2B_Q143R	0.624	0.386
Noto M02101_2.00	Mus musculus	NNHHATDDNN	NNHHATDDNN	PBM Weirauch et al.(2014) pTH6268	0.612	0.333
ISX M00318_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) ISX_R83Q	0.612	0.368
VSX1 M00269_2.00	Homo sapiens	NNWAAYNNN	NNNRTTWNN	PBM Barrera et al.(2016) VSX1_REF	0.608	0.386
Vsx1 M00459_2.00	Mus musculus	NNTAATDDN	NHHATTANN	PBM Berger et al.(2008) Vsx1_1728	0.608	0.386
Vsx1 M03267_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Vsx1_1	0.608	0.386
VSX1 M00266_2.00	Homo sapiens	NNTAAYNNN	NNNRTTANN	PBM Barrera et al.(2016) VSX1_G160D	0.608	0.386
ceh-5 M02179_2.00	Caenorhabditis elegans	NNTAATDDN	NHHATTANN	PBM Weirauch et al.(2014) pTH6562	0.604	0.368
Prop1 M00498_2.00	Mus musculus	NRAKDDN	NHHMTYN	PBM Berger et al.(2008) Prop1_3949	0.602	0.439
Prop1 M09210_2.00	Mus musculus	TAATKRRATTA	TAATYYMATTA	Misc Kulakovskiy et al.(2013) PROP1_MOUSE.H11MO.0.C	0.602	0.439
PROP1 M00317_2.00	Homo sapiens	HAAYNNNNNN	NNNNNNRTTD	PBM Barrera et al.(2016) PROP1_REF	0.602	0.421
PROP1 M03216_2.00	Homo sapiens	TAATTHRATTA	TAATYDAATTA	SELEX Jolma et al.(2013) PROP1_1	0.602	0.421
PROP1 M03217_2.00	Homo sapiens	TAATKNRRTTA	TAAYYNMATTA	SELEX Jolma et al.(2013) PROP1_2	0.602	0.421
PROP1 M05298_2.00	Homo sapiens	WAATTNNRTTD	HAAYNNAATTW	SELEX Yin et al.(2017) PROP1_eDBD_HT-SELEX	0.602	0.421
PROP1 M05301_2.00	Homo sapiens	TAATTNVATTA	TAATBNAATTA	SELEX Yin et al.(2017) PROP1_FL_HT-SELEX	0.602	0.421
PROP1 M10777_2.00	Sus scrofa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_01	0.602	0.421
PROP1 M10737_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PROP1_Q2	0.602	0.421
PROP1 M00315_2.00	Homo sapiens	NNHNATNN	NNATNDNN	PBM Barrera et al.(2016) PROP1_R112Q	0.602	0.421
PROP1 M00316_2.00	Homo sapiens	DTAATTRK	MYAATTAH	PBM Barrera et al.(2016) PROP1_R99Q	0.602	0.421
PROP1 M05299_2.00	Homo sapiens	TAATTNVRTTW	WAAYBNAATTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_1	0.602	0.421
PROP1 M05300_2.00	Homo sapiens	TAAYNDCRTTA	TAAYGHNRTTA	SELEX Yin et al.(2017) PROP1_eDBD_Methyl-HT-SELEX_2	0.602	0.421
PROP1 M05302_2.00	Homo sapiens	TAATTNVRTTA	TAAYBNAATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_1	0.602	0.421
PROP1 M05303_2.00	Homo sapiens	TAATYRVRTTA	TAAYBYRATTA	SELEX Yin et al.(2017) PROP1_FL_Methyl-HT-SELEX_2	0.602	0.421
CG18599 M06539_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Mathelier et al.(2014) MA0177.1	0.602	0.316
CG18599 M06354_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Zhu et al.(2011) CG18599_Cell_FBgn0038592	0.602	0.316
CG18599 M06355_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) CG18599_SOLEXA_FBgn0038592	0.602	0.316
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GPLIN_001387100	Homeodomain	674	730	QRVRTVLNENQLKILKQTYHGNQRPDTNTKEQLVEMTGLNARVIRVWFQNKRCKDKK

Links
Other Homeodomain family TFs
Other *Globodera pallida* TFs

Invalid Input OrderBy

533 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action

GPLIN_001387100 (Globodera pallida) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

533 Related TFs

Invalid Input OrderBy

GPLIN_001387100 **(Globodera pallida)
Homeodomain**