HmN_000117000 (Hymenolepis microstoma)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 HmN_000117000 T234287_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
si:dkey-43p13.5
M02082_2.00 		Danio rerio
DNWNWWNWNH
DNWNWWNWNH		 PBM
Weirauch et al.(2014)
pTH6636 		0.631 0.439
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HmN_000117000 Homeodomain 185 241

Links

Other Homeodomain family TFs
Other Hymenolepis microstoma TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HNAJ_0000198401 Hymenolepis nana HNAJ_0000198401 I 0.865
EmuJ_000969400 Echinococcus multilocularis EmuJ_000969400 I 0.857
ECANG7_05958 Echinococcus canadensis ECANG7_05958 I 0.857
TASK_0000401401 Taenia asiatica TASK_0000401401 I 0.857
TsM_000060800 Taenia solium TsM_000060800 I 0.857
MCOS_0000430501 Mesocestoides corti MCOS_0000430501 N 0.802
ECPE_0000063701 Echinostoma caproni ECPE_0000063701 N 0.732
A_06302 Schistosoma haematobium A_06302 N 0.720
SMTD_0000698001 Schistosoma mattheei SMTD_0000698001 N 0.720
Sjc_0058060 Schistosoma japonicum Sjc_0058060 N 0.720
Smp_060750 Schistosoma mansoni Smp_060750 N 0.720
ENSACAG00000015317 Anolis carolinensis ENSACAG00000015317 I 0.667
nanog Danio rerio ENSDARG00000075113 I 0.658
ENSXMAG00000009360 Xiphophorus maculatus ENSXMAG00000009360 I 0.632
ENSPFOG00000012326 Poecilia formosa ENSPFOG00000012326 I 0.632
ENSLACG00000013029 Latimeria chalumnae ENSLACG00000013029 I 0.631
ENSLOCG00000001266 Lepisosteus oculatus ENSLOCG00000001266 I 0.631
ENSGMOG00000003173 Gadus morhua ENSGMOG00000003173 I 0.631
si:dkey-43p13.5 Gasterosteus aculeatus ENSGACG00000014085 I 0.631
XP_002942085 Xenopus tropicalis XP_002942085 I 0.631
si:dkey-43p13.5 Danio rerio ENSDARG00000104199 D 0.631
ENSONIG00000001348 Oreochromis niloticus ENSONIG00000001348 I 0.631
MICALL2 Takifugu rubripes ENSTRUG00000013527 I 0.631
ENSTNIG00000018605 Tetraodon nigroviridis ENSTNIG00000018605 I 0.631
si:dkey-43p13.5 Oryzias latipes ENSORLG00000004744 I 0.631
Alligator_sinensis_CCG005285.1 Alligator sinensis Alligator_sinensis_CCG005285.1 I 0.631
Sakowv30039034m.g Saccoglossus kowalevskii Sakowv30039034m.g I 0.627
ENSPFOG00000009708 Poecilia formosa ENSPFOG00000009708 I 0.626
SMRZ_0000473601 Schistosoma margrebowiei SMRZ_0000473601 I 0.609
Smp_152980 Schistosoma mansoni Smp_152980 I 0.609
ENSAMXG00000009415 Astyanax mexicanus ENSAMXG00000009415 I 0.608
ENSCSAVG00000001261 Ciona savignyi ENSCSAVG00000001261 I 0.607
csin110741 Clonorchis sinensis csin110741 I 0.607
CGOC_0001018301 Cylicostephanus goldi CGOC_0001018301 I 0.605