CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
HNAJ_0000198401
(
Hymenolepis nana
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
HNAJ_0000198401
T234348_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
si:dkey-43p13.5
M02082_2.00
Danio rerio
DNWNWWNWNH
DNWNWWNWNH
PBM
Weirauch et al.(2014)
pTH6636
0.631
0.439
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HNAJ_0000198401-mRNA-1
Homeodomain
185
241
RKARAYFQPHHLRALEGFYKQQTYLSTHDRELLAQRLNLSEDRIRTWFQNRRMKEKR
Links
Other
Homeodomain
family TFs
Other
Hymenolepis nana
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HmN_000117000
Hymenolepis microstoma
HmN_000117000
I
0.865
EmuJ_000969400
Echinococcus multilocularis
EmuJ_000969400
I
0.857
ECANG7_05958
Echinococcus canadensis
ECANG7_05958
I
0.857
TASK_0000401401
Taenia asiatica
TASK_0000401401
I
0.857
TsM_000060800
Taenia solium
TsM_000060800
I
0.857
MCOS_0000430501
Mesocestoides corti
MCOS_0000430501
N
0.802
ECPE_0000063701
Echinostoma caproni
ECPE_0000063701
N
0.732
A_06302
Schistosoma haematobium
A_06302
N
0.720
SMTD_0000698001
Schistosoma mattheei
SMTD_0000698001
N
0.720
Sjc_0058060
Schistosoma japonicum
Sjc_0058060
N
0.720
Smp_060750
Schistosoma mansoni
Smp_060750
N
0.720
ENSACAG00000015317
Anolis carolinensis
ENSACAG00000015317
I
0.667
nanog
Danio rerio
ENSDARG00000075113
I
0.658
ENSXMAG00000009360
Xiphophorus maculatus
ENSXMAG00000009360
I
0.632
ENSPFOG00000012326
Poecilia formosa
ENSPFOG00000012326
I
0.632
ENSLACG00000013029
Latimeria chalumnae
ENSLACG00000013029
I
0.631
ENSLOCG00000001266
Lepisosteus oculatus
ENSLOCG00000001266
I
0.631
ENSGMOG00000003173
Gadus morhua
ENSGMOG00000003173
I
0.631
si:dkey-43p13.5
Gasterosteus aculeatus
ENSGACG00000014085
I
0.631
XP_002942085
Xenopus tropicalis
XP_002942085
I
0.631
si:dkey-43p13.5
Danio rerio
ENSDARG00000104199
D
0.631
ENSONIG00000001348
Oreochromis niloticus
ENSONIG00000001348
I
0.631
MICALL2
Takifugu rubripes
ENSTRUG00000013527
I
0.631
ENSTNIG00000018605
Tetraodon nigroviridis
ENSTNIG00000018605
I
0.631
si:dkey-43p13.5
Oryzias latipes
ENSORLG00000004744
I
0.631
Alligator_sinensis_CCG005285.1
Alligator sinensis
Alligator_sinensis_CCG005285.1
I
0.631
Sakowv30039034m.g
Saccoglossus kowalevskii
Sakowv30039034m.g
I
0.627
ENSPFOG00000009708
Poecilia formosa
ENSPFOG00000009708
I
0.626
SMRZ_0000473601
Schistosoma margrebowiei
SMRZ_0000473601
I
0.609
Smp_152980
Schistosoma mansoni
Smp_152980
I
0.609
ENSAMXG00000009415
Astyanax mexicanus
ENSAMXG00000009415
I
0.608
ENSCSAVG00000001261
Ciona savignyi
ENSCSAVG00000001261
I
0.607
csin110741
Clonorchis sinensis
csin110741
I
0.607
CGOC_0001018301
Cylicostephanus goldi
CGOC_0001018301
I
0.605