HPLM_0000198901 (Haemonchus placei)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 HPLM_0000198901 T234433_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFHX3
M01849_2.00 		Homo sapiens
NNNRMTNDN
NHNAKYNNN		 PBM
Weirauch et al.(2014)
pTH6494 		0.741 0.727
ENSTNIG00000004116
M02105_2.00 		Tetraodon nigroviridis
TTAATTAG
CTAATTAA		 PBM
Weirauch et al.(2014)
pTH6772 		0.664 0.545
Rax
M00426_2.00 		Mus musculus
NNTAATTRN
NYAATTANN		 PBM
Berger et al.(2008)
Rax_3443 		0.605 0.455
RAX
M03149_2.00 		Homo sapiens
NHTAATTRNN
NNYAATTADN		 SELEX
Jolma et al.(2013)
RAX_1 		0.605 0.455
Rx
M03840_2.00 		Drosophila melanogaster
BTAATTRV
BYAATTAV		 SELEX
Nitta et al.(2015)
Rx_1 		0.605 0.455
Rx
M03841_2.00 		Drosophila melanogaster
NTAATBNSATTAN
NTAATSNVATTAN		 SELEX
Nitta et al.(2015)
Rx_2 		0.605 0.455
RAX
M05142_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
RAX_eDBD_HT-SELEX 		0.605 0.455
Rx
M06520_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0202.1 		0.605 0.455
Rx
M06317_2.00 		Drosophila melanogaster
VYTAATTR
YAATTARB		 B1H
Zhu et al.(2011)
Rx_Cell_FBgn0020617 		0.605 0.455
Rx
M06318_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
Rx_SOLEXA_FBgn0020617 		0.605 0.455
Rax
M10773_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RAX_04 		0.605 0.455
RAX
M05143_2.00 		Homo sapiens
NTAAYRNN
NNYRTTAN		 SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_1 		0.605 0.455
RAX
M05144_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_2 		0.605 0.455
unc-4
M03846_2.00 		Drosophila melanogaster
TAATTNAATTA
TAATTNAATTA		 SELEX
Nitta et al.(2015)
unc-4_1 		0.603 0.400
unc-4
M06523_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0250.1 		0.603 0.400
RAX2
M03214_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
RAXL1_1 		0.600 0.436
DRGX
M03199_2.00 		Homo sapiens
NTAATTNRATTAN
NTAATYNAATTAN		 SELEX
Jolma et al.(2013)
DRGX_1 		0.600 0.418
CG2808
M03875_2.00 		Drosophila melanogaster
TAATYNSRTTA
TAAYSNRATTA		 SELEX
Nitta et al.(2015)
CG2808_1 		0.600 0.418
CG9876
M03865_2.00 		Drosophila melanogaster
SVTVATBRSN
NSYVATBABS		 SELEX
Nitta et al.(2015)
CG9876_1 		0.600 0.418
CG9876
M03866_2.00 		Drosophila melanogaster
NTAATTRV
BYAATTAN		 SELEX
Nitta et al.(2015)
CG9876_2 		0.600 0.418
CG9876
M03867_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
CG9876_3 		0.600 0.418
CG9876
M03868_2.00 		Drosophila melanogaster
TAATTRVNTAATTR
YAATTANBYAATTA		 SELEX
Nitta et al.(2015)
CG9876_4 		0.600 0.418
DRGX
M05253_2.00 		Homo sapiens
NTAATTRR
YYAATTAN		 SELEX
Yin et al.(2017)
DRGX_eDBD_HT-SELEX 		0.600 0.418
CG9876
M06537_2.00 		Drosophila melanogaster
BTAATTR
YAATTAV		 B1H
Mathelier et al.(2014)
MA0184.1 		0.600 0.418
CG9876
M06350_2.00 		Drosophila melanogaster
DBTAATTR
YAATTAVH		 B1H
Zhu et al.(2011)
CG9876_Cell_FBgn0034821 		0.600 0.418
CG9876
M06351_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
CG9876_SOLEXA_FBgn0034821 		0.600 0.418
Drgx
M10774_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRRXL1_01 		0.600 0.418
DRGX
M05254_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
DRGX_eDBD_Methyl-HT-SELEX 		0.600 0.418
OdsH
M03851_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
OdsH_1 		0.600 0.436
OdsH
M03852_2.00 		Drosophila melanogaster
TAATBNVATTA
TAATBNVATTA		 SELEX
Nitta et al.(2015)
OdsH_2 		0.600 0.436
OdsH
M06528_2.00 		Drosophila melanogaster
BTAATTR
YAATTAV		 B1H
Mathelier et al.(2014)
MA0198.1 		0.600 0.436
OdsH
M06330_2.00 		Drosophila melanogaster
BTAATTR
YAATTAV		 B1H
Zhu et al.(2011)
Odsh_Cell_FBgn0026058 		0.600 0.436
OdsH
M06331_2.00 		Drosophila melanogaster
NHTAATTR
YAATTADN		 B1H
Zhu et al.(2011)
Odsh_SOLEXA_FBgn0026058 		0.600 0.436
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPLM_0000198901-mRNA-1 Homeodomain 103 157

Links

Other Homeodomain family TFs
Other Haemonchus placei TFs

Invalid Input OrderBy

346 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action