L892_g24303 (Steinernema scapterisci)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 L892_g24303 T234759_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB

VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.719 0.516
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH

DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.706 0.242
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD

HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.706 0.242
HESX1
M05227_2.00
Homo sapiens
DYAATTRV

BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.706 0.242
HESX1
M05228_2.00
Homo sapiens
NYAATTRD

HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.706 0.242
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g24303.t1 Homeodomain 106 151
L892_g24303.t1 Homeodomain 241 256

Links

Other Homeodomain family TFs
Other Steinernema scapterisci TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZFP41 Homo sapiens ENSG00000181638 D 0.000
ENSCAFG00000029869 Canis familiaris ENSCAFG00000029869 I 0.000
ENSTTRG00000002889 Tursiops truncatus ENSTTRG00000002889 I 0.000
ENSTSYG00000005406 Tarsius syrichta ENSTSYG00000005406 I 0.000
ENSTBEG00000012843 Tupaia belangeri ENSTBEG00000012843 I 0.000
ENSSTOG00000022550 Ictidomys tridecemlineatus ENSSTOG00000022550 I 0.000
Zfp41 Rattus norvegicus ENSRNOG00000007489 I 0.000
ZFP41 Pan troglodytes ENSPTRG00000040000 I 0.000
Zfp41 Mus musculus ENSMUSG00000047003 I 0.000
AC138696.1 Homo sapiens ENSG00000264668 I 0.000
ENSCSAG00000018633 Chlorocebus sabaeus ENSCSAG00000018633 I 0.000
ENSCJAG00000038069 Callithrix jacchus ENSCJAG00000038069 I 0.000
Myotis_brandtii_ZFP41_10003885 Myotis brandtii Myotis_brandtii_ZFP41_10003885 I 0.000