CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L892_g2973
(
Steinernema scapterisci
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
L892_g2973
T234790_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ceh-23
M00671_2.00
Caenorhabditis elegans
HTAATTRNNN
NNNYAATTAD
PBM
Narasimhan et al.(2015)
pTH9478
0.632
0.684
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L892_g2973.t1
Homeodomain
125
181
RKQRSIYGSSQTRELELAFETQQYVVGSEREQLAHKLGLSESQVRVWFQNRRSKHRK
Links
Other
Homeodomain
family TFs
Other
Steinernema scapterisci
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g15531
Steinernema feltiae
L889_g15531
I
0.846
L596_g8967
Steinernema carpocapsae
L596_g8967
I
0.846
L893_g9970
Steinernema glaseri
L893_g9970
I
0.846
Hba_20723
Heterorhabditis bacteriophora
Hba_20723
I
0.701
ALUE_0001674701
Ascaris lumbricoides
ALUE_0001674701
I
0.692
ASU_04225
Ascaris suum
ASU_04225
I
0.692
DME_0000392201
Dracunculus medinensis
DME_0000392201
I
0.692
ASIM_0000837901
Anisakis simplex
ASIM_0000837901
I
0.692
nAv.1.0.1.g03426
Acanthocheilonema viteae
nAv.1.0.1.g03426
I
0.690
TCLT_0000189001
Thelazia callipaeda
TCLT_0000189001
I
0.690
OFLC_0000389601
Onchocerca flexuosa
OFLC_0000389601
I
0.690
nOo.2.0.1.g10062
Onchocerca ochengi
nOo.2.0.1.g10062
I
0.690
nLs.2.1.2.g09340
Litomosoides sigmodontis
nLs.2.1.2.g09340
I
0.690
nDi.2.2.2.g00432
Dirofilaria immitis
nDi.2.2.2.g00432
I
0.690
BTMF_0001439101
Brugia timori
BTMF_0001439101
I
0.690
Bm7522
Brugia malayi
Bm7522
I
0.690
EEL_0001067901
Elaeophora elaphi
EEL_0001067901
I
0.690
LOAG_06831
Loa loa
LOAG_06831
I
0.690
WUBG_10381
Wuchereria bancrofti
WUBG_10381
I
0.690
WBGene00244975
Onchocerca volvulus
WBGene00244975
I
0.690
CBN12157
Caenorhabditis brenneri
CBN12157
I
0.632
CRE26659
Caenorhabditis remanei
CRE26659
I
0.632
ceh-23
Caenorhabditis elegans
WBGene00000446
D
0.632
CBG26055
Caenorhabditis briggsae
CBG26055
I
0.632
ENSLACG00000015207
Latimeria chalumnae
ENSLACG00000015207
I
0.630
MCOS_0000351601
Mesocestoides corti
MCOS_0000351601
I
0.600