maker-nMf.1.1.scaf00145-augustus-gene-0.13 (Meloidogyne floridensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 maker-nMf.1.1.scaf00145-augustus-gene-0.13 T235017_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Uncx
M00443_2.00
Mus musculus
NTAATNDN

NHNATTAN
PBM
Berger et al.(2008)
Uncx4
0.613 0.784
uncx
M02111_2.00
Tetraodon nigroviridis
NNTAATTRN

NYAATTANN
PBM
Weirauch et al.(2014)
pTH5474
0.613 0.784
UNCX
M03191_2.00
Homo sapiens
NWAATTVVRTHWN

NWDAYBBAATTWN
SELEX
Jolma et al.(2013)
UNCX_1
0.613 0.784
UNCX
M03192_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
UNCX_2
0.613 0.784
Uncx
M03264_2.00
Mus musculus
NTAATTVRATTAN

NTAATYBAATTAN
SELEX
Jolma et al.(2013)
Uncx_1
0.613 0.784
Uncx
M03265_2.00
Mus musculus
NTAATTRR

YYAATTAN
SELEX
Jolma et al.(2013)
Uncx_2
0.613 0.784
UNCX
M05240_2.00
Homo sapiens
NYAATTRV

BYAATTRN
SELEX
Yin et al.(2017)
UNCX_eDBD_HT-SELEX
0.613 0.784
UNCX
M05241_2.00
Homo sapiens
NYRRYKNN

NNMRYYRN
SELEX
Yin et al.(2017)
UNCX_eDBD_Methyl-HT-SELEX
0.613 0.784
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf00145-augustus-gene-0.13-mRNA-1 Homeodomain 231 281

Links

Other Homeodomain family TFs
Other Meloidogyne floridensis TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NEMVEDRAFT_v1g93991 Nematostella vectensis NEMVEDRAFT_v1g93991 I 0.745
ALX1 Gorilla gorilla ENSGGOG00000000168 I 0.737
ENSMPUG00000006459 Mustela putorius furo ENSMPUG00000006459 I 0.735
NEMVEDRAFT_v1g49015 Nematostella vectensis NEMVEDRAFT_v1g49015 I 0.734
NEMVEDRAFT_v1g48953 Nematostella vectensis NEMVEDRAFT_v1g48953 I 0.734
ACHR010176 Anopheles christyi ACHR010176 N 0.712
BGLB003458 Biomphalaria glabrata BGLB003458 I 0.712
Cmyd_10002827 Chelonia mydas Cmyd_10002827 N 0.706
DILT_0000923301 Diphyllobothrium latum DILT_0000923301 I 0.705
OTP Pteropus vampyrus ENSPVAG00000011630 I 0.702
ENSGMOG00000015411 Gadus morhua ENSGMOG00000015411 I 0.697
Smp_189380 Schistosoma mansoni Smp_189380 I 0.693
PXEA_0001895501 Protopolystoma xenopodis PXEA_0001895501 I 0.693
ENSMGAG00000015339 Meleagris gallopavo ENSMGAG00000015339 I 0.693
LCUP002254 Lucilia cuprina LCUP002254 N 0.693
C_01031 Schistosoma haematobium C_01031 I 0.693
SMTD_0002280601 Schistosoma mattheei SMTD_0002280601 I 0.693
C_01032 Schistosoma haematobium C_01032 I 0.693
SROB_0001108301 Schistosoma rodhaini SROB_0001108301 I 0.693
WUBG_03794 Wuchereria bancrofti WUBG_03794 N 0.690
e_gw.549.21.1 Branchiostoma floridae e_gw.549.21.1 I 0.688
ENSGMOG00000011340 Gadus morhua ENSGMOG00000011340 N 0.688
ISCW024267 Ixodes scapularis ISCW024267 I 0.688
nRc.2.0.1.g34717 Romanomermis culicivorax nRc.2.0.1.g34717 I 0.684
CLEC000966 Cimex lectularius CLEC000966 N 0.679
AQUA001638 Anopheles quadriannulatus AQUA001638 I 0.676
ACOM028612 Anopheles coluzzii ACOM028612 I 0.676
AARA006634 Anopheles arabiensis AARA006634 I 0.676
AGAP003574 Anopheles gambiae AGAP003574 I 0.676
PEQ_0000006101 Parascaris equorum PEQ_0000006101 N 0.675
NKX1-1 Pan troglodytes ENSPTRG00000041220 I 0.674
AMEC003288 Anopheles melas AMEC003288 N 0.666
MEOX1 Bos taurus ENSBTAG00000015751 I 0.666
MCINX000309 Melitaea cinxia MCINX000309 I 0.666
ENSPANG00000025837 Papio anubis ENSPANG00000025837 I 0.662
SCUD_0001719701 Schistosoma curassoni SCUD_0001719701 I 0.660
Smp_165410 Schistosoma mansoni Smp_165410 I 0.660
ACOM034313 Anopheles coluzzii ACOM034313 I 0.659
OFLC_0001568801 Onchocerca flexuosa OFLC_0001568801 I 0.655
SCUD_0000812901 Schistosoma curassoni SCUD_0000812901 I 0.653
L893_g26530 Steinernema glaseri L893_g26530 I 0.653
PXEA_0002510601 Protopolystoma xenopodis PXEA_0002510601 I 0.652
ANCDUO_14705 Ancylostoma duodenale ANCDUO_14705 I 0.652
ANCCEY_05038 Ancylostoma ceylanicum ANCCEY_05038 I 0.652
nLs.2.1.2.g00296 Litomosoides sigmodontis nLs.2.1.2.g00296 I 0.652
NECAME_15973 Necator americanus NECAME_15973 I 0.652
TRE_0000860801 Trichobilharzia regenti TRE_0000860801 I 0.652
ENSPSIG00000005438 Pelodiscus sinensis ENSPSIG00000005438 I 0.651
ENSTSYG00000012674 Tarsius syrichta ENSTSYG00000012674 I 0.651
tetur14g02380 Tetranychus urticae tetur14g02380 I 0.649
TELCIR_07155 Teladorsagia circumcincta TELCIR_07155 I 0.649
DME_0001008101 Dracunculus medinensis DME_0001008101 I 0.649
ENSPFOG00000017586 Poecilia formosa ENSPFOG00000017586 I 0.648
PDX1 Dasypus novemcinctus ENSDNOG00000003213 I 0.647
ENSOARG00000018096 Ovis aries ENSOARG00000018096 I 0.647
ENSGGOG00000027271 Gorilla gorilla ENSGGOG00000027271 I 0.647
augustus_masked-nMf.1.1.scaf12078-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf12078-processed-gene-0.0 I 0.646
BTMF_0000584401 Brugia timori BTMF_0000584401 I 0.646
nAv.1.0.1.g03166 Acanthocheilonema viteae nAv.1.0.1.g03166 I 0.646
PEQ_0001172001 Parascaris equorum PEQ_0001172001 I 0.646
WUBG_01783 Wuchereria bancrofti WUBG_01783 I 0.644
ALUE_0001238401 Ascaris lumbricoides ALUE_0001238401 I 0.644
Hba_17613 Heterorhabditis bacteriophora Hba_17613 I 0.644
ASIM_0001502101 Anisakis simplex ASIM_0001502101 I 0.644
LOAG_02387 Loa loa LOAG_02387 I 0.642
LOAG_17577 Loa loa LOAG_17577 N 0.642
BARHL2 Vicugna pacos ENSVPAG00000005913 I 0.642
BARHL2 Monodelphis domestica ENSMODG00000012056 I 0.642
TASK_0000431401 Taenia asiatica TASK_0000431401 I 0.642
Alligator_sinensis_CCG007467.1 Alligator sinensis Alligator_sinensis_CCG007467.1 I 0.642
CGI_10009942 Crassostrea gigas CGI_10009942 I 0.642
WBGene00242173 Onchocerca volvulus WBGene00242173 I 0.642
CapteG30874 Capitella teleta CapteG30874 I 0.642
PXEA_0001255201 Protopolystoma xenopodis PXEA_0001255201 I 0.642
MhA1_Contig899.frz3.gene1 Meloidogyne hapla MhA1_Contig899.frz3.gene1 I 0.642
Aan_R000875 Calypte anna Aan_R000875 I 0.642
Sakowv30043910m.g Saccoglossus kowalevskii Sakowv30043910m.g I 0.642
ENSMGAG00000006701 Meleagris gallopavo ENSMGAG00000006701 I 0.642
SINV18014 Solenopsis invicta SINV18014 I 0.641
MESCA011262 Megaselia scalaris MESCA011262 I 0.641
MESCA003890 Megaselia scalaris MESCA003890 I 0.641
CLEC007879 Cimex lectularius CLEC007879 I 0.641
Afo_R001648 Aptenodytes forsteri Afo_R001648 I 0.641
ENSORLG00000012370 Oryzias latipes ENSORLG00000012370 I 0.641
DAPPUDRAFT_55144 Daphnia pulex DAPPUDRAFT_55144 I 0.641
LotgiG120200 Lottia gigantea LotgiG120200 I 0.641
BARHL1 Felis catus ENSFCAG00000007105 I 0.641
TsM_000296500 Taenia solium TsM_000296500 I 0.641
ACUA028387 Anopheles culicifacies ACUA028387 I 0.641
ASIS004766 Anopheles sinensis ASIS004766 I 0.641
LLOJ004353 Lutzomyia longipalpis LLOJ004353 I 0.641
ENSPFOG00000024523 Poecilia formosa ENSPFOG00000024523 I 0.640
Smp_125600 Schistosoma mansoni Smp_125600 I 0.640
OFLC_0000069201 Onchocerca flexuosa OFLC_0000069201 I 0.638
TCNE_0001765901 Toxocara canis TCNE_0001765901 I 0.638
nOo.2.0.1.g00955 Onchocerca ochengi nOo.2.0.1.g00955 I 0.638
TCLT_0000599001 Thelazia callipaeda TCLT_0000599001 I 0.638
EEL_0000392901 Elaeophora elaphi EEL_0000392901 I 0.638
ASIM_0000400001 Anisakis simplex ASIM_0000400001 I 0.638
ACAC_0000394201 Angiostrongylus cantonensis ACAC_0000394201 I 0.638
ASIM_0001653501 Anisakis simplex ASIM_0001653501 I 0.638
CGOC_0000550601 Cylicostephanus goldi CGOC_0000550601 I 0.638
EVEC_0000662001 Enterobius vermicularis EVEC_0000662001 I 0.638
GPUH_0002067401 Gongylonema pulchrum GPUH_0002067401 I 0.638
WBGene00245266 Onchocerca volvulus WBGene00245266 I 0.638
WUBG_02861 Wuchereria bancrofti WUBG_02861 I 0.638
ENSGACG00000020715 Gasterosteus aculeatus ENSGACG00000020715 I 0.631
nOo.2.0.1.g01207 Onchocerca ochengi nOo.2.0.1.g01207 I 0.631
ANCDUO_02875 Ancylostoma duodenale ANCDUO_02875 I 0.631
GPUH_0000001901 Gongylonema pulchrum GPUH_0000001901 I 0.631
DME_0000365001 Dracunculus medinensis DME_0000365001 I 0.631
PEQ_0000367601 Parascaris equorum PEQ_0000367601 I 0.631
ENSGMOG00000006424 Gadus morhua ENSGMOG00000006424 I 0.631
NBR_0000568501 Nippostrongylus brasiliensis NBR_0000568501 I 0.631
TriadG9178 Trichoplax adhaerens TriadG9178 N 0.631
TCLT_0000305201 Thelazia callipaeda TCLT_0000305201 I 0.631
ALUE_0001765001 Ascaris lumbricoides ALUE_0001765001 I 0.630
L893_g30689 Steinernema glaseri L893_g30689 I 0.618
L596_g27362 Steinernema carpocapsae L596_g27362 I 0.618
L892_g11829 Steinernema scapterisci L892_g11829 I 0.618
L889_g5677 Steinernema feltiae L889_g5677 I 0.618
nRc.2.0.1.g31059 Romanomermis culicivorax nRc.2.0.1.g31059 I 0.618
L898_g3968 Steinernema monticolum L898_g3968 I 0.618
ASIS018158 Anopheles sinensis ASIS018158 N 0.617
DICVIV_04289 Dictyocaulus viviparus DICVIV_04289 I 0.614
BXY_0660800 Bursaphelenchus xylophilus BXY_0660800 I 0.614
D917_04035 Trichinella nativa D917_04035 I 0.614
D918_07885 Trichuris suis D918_07885 I 0.614
Hba_21230 Heterorhabditis bacteriophora Hba_21230 I 0.614
TTRE_0000068101 Trichuris trichiura TTRE_0000068101 I 0.614
ARX Loxodonta africana ENSLAFG00000001779 I 0.614
nLs.2.1.2.g02156 Litomosoides sigmodontis nLs.2.1.2.g02156 I 0.614
CRE07705 Caenorhabditis remanei CRE07705 I 0.614
scaffold1027-EXSNAP2012.2 Pristionchus exspectatus scaffold1027-EXSNAP2012.2 I 0.614
TCLT_0000475701 Thelazia callipaeda TCLT_0000475701 I 0.614
CJA15792 Caenorhabditis japonica CJA15792 I 0.614
nAv.1.0.1.g02637 Acanthocheilonema viteae nAv.1.0.1.g02637 I 0.614
TMUE_s0002002300 Trichuris muris TMUE_s0002002300 I 0.614
EFV52386 Trichinella spiralis EFV52386 I 0.614
DME_0000869301 Dracunculus medinensis DME_0000869301 I 0.614
Ppa-unc-4 Pristionchus pacificus PPA21358 I 0.614
LOAG_17921 Loa loa LOAG_17921 I 0.614
unc-4 Caenorhabditis elegans WBGene00006744 I 0.614
UNCX Homo sapiens ENSG00000164853 D 0.613
UNCX Tursiops truncatus ENSTTRG00000011507 I 0.613
uncx Danio rerio ENSDARG00000102976 I 0.613
uncx4.1 Danio rerio ENSDARG00000037760 I 0.613
ENSGALG00000019025 Gallus gallus ENSGALG00000019025 I 0.613
UNCX Pteropus vampyrus ENSPVAG00000002725 I 0.613
ENSLACG00000009869 Latimeria chalumnae ENSLACG00000009869 I 0.613
ENSXMAG00000009363 Xiphophorus maculatus ENSXMAG00000009363 I 0.613
UNCX Cavia porcellus ENSCPOG00000023875 I 0.613
ENSXMAG00000011506 Xiphophorus maculatus ENSXMAG00000011506 I 0.613
ENSCING00000009645 Ciona intestinalis ENSCING00000009645 I 0.613
Myotis_brandtii_Uncx_10006127 Myotis brandtii Myotis_brandtii_Uncx_10006127 I 0.613
Pvit_17535 Pogona vitticeps Pvit_17535 I 0.613
Cmyd_10012401 Chelonia mydas Cmyd_10012401 I 0.613
CGI_10007529 Crassostrea gigas CGI_10007529 I 0.613
Alligator_sinensis_CCG005287.1 Alligator sinensis Alligator_sinensis_CCG005287.1 I 0.613
e_gw.5.490.1 Branchiostoma floridae e_gw.5.490.1 I 0.613
ENSAMEG00000015251 Ailuropoda melanoleuca ENSAMEG00000015251 I 0.613
UNCX Canis familiaris ENSCAFG00000011794 I 0.613
ENSAPLG00000013520 Anas platyrhynchos ENSAPLG00000013520 I 0.613
ENSAMXG00000018433 Astyanax mexicanus ENSAMXG00000018433 I 0.613
ENSAMXG00000003796 Astyanax mexicanus ENSAMXG00000003796 I 0.613
uncx4.1 Takifugu rubripes ENSTRUG00000015845 I 0.613
XP_002938457 Xenopus tropicalis XP_002938457 I 0.613
ENSONIG00000001352 Oreochromis niloticus ENSONIG00000001352 I 0.613
ENSONIG00000003846 Oreochromis niloticus ENSONIG00000003846 I 0.613
ENSSHAG00000001025 Sarcophilus harrisii ENSSHAG00000001025 I 0.613
UNCX Sus scrofa ENSSSCG00000007555 I 0.613
uncx Takifugu rubripes ENSTRUG00000013503 I 0.613
ENSORLG00000004749 Oryzias latipes ENSORLG00000004749 I 0.613
Uncx Rattus norvegicus ENSRNOG00000001284 I 0.613
ENSPFOG00000013598 Poecilia formosa ENSPFOG00000013598 I 0.613
ENSPFOG00000012255 Poecilia formosa ENSPFOG00000012255 I 0.613
UNCX Procavia capensis ENSPCAG00000011228 I 0.613
ENSPANG00000022875 Papio anubis ENSPANG00000022875 I 0.613
ENSSTOG00000024762 Ictidomys tridecemlineatus ENSSTOG00000024762 I 0.613
UNCX Otolemur garnettii ENSOGAG00000029082 I 0.613
ENSMPUG00000017899 Mustela putorius furo ENSMPUG00000017899 I 0.613
ENSNLEG00000008468 Nomascus leucogenys ENSNLEG00000008468 I 0.613
uncx Tetraodon nigroviridis ENSTNIG00000018604 D 0.613
ENSLOCG00000001224 Lepisosteus oculatus ENSLOCG00000001224 I 0.613
ENSTGUG00000008332 Taeniopygia guttata ENSTGUG00000008332 I 0.613
uncx4.1 Tetraodon nigroviridis ENSTNIG00000008239 I 0.613
ENSMEUG00000016020 Macropus eugenii ENSMEUG00000016020 I 0.613
Uncx Mus musculus ENSMUSG00000029546 D 0.613
GPLIN_001372300 Globodera pallida GPLIN_001372300 I 0.612
CBG00998 Caenorhabditis briggsae CBG00998 I 0.612
CapteG71005 Capitella teleta CapteG71005 N 0.610
alx4b Danio rerio ENSDARG00000074442 I 0.608
WBGene00248105 Onchocerca volvulus WBGene00248105 I 0.606
PEQ_0000070601 Parascaris equorum PEQ_0000070601 N 0.606
SPU_001739 Strongylocentrotus purpuratus SPU_001739 I 0.605
SMAR011174 Strigamia maritima SMAR011174 I 0.604
SMAR011175 Strigamia maritima SMAR011175 I 0.603
TRE_0000252001 Trichobilharzia regenti TRE_0000252001 I 0.602
tetur04g00320 Tetranychus urticae tetur04g00320 I 0.602
SCUD_0001346801 Schistosoma curassoni SCUD_0001346801 I 0.602
A_05457 Schistosoma haematobium A_05457 I 0.602
HOXC4 Procavia capensis ENSPCAG00000011039 I 0.602
Sjc_0070190 Schistosoma japonicum Sjc_0070190 I 0.602
MNX1 Homo sapiens ENSG00000130675 D 0.602
LotgiG67517 Lottia gigantea LotgiG67517 I 0.601
Sakowv30039029m.g Saccoglossus kowalevskii Sakowv30039029m.g I 0.601
SMU15026085 Schmidtea mediterranea SMU15026085 I 0.599