MhA1_Contig726.frz3.gene2 (Meloidogyne hapla)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MhA1_Contig726.frz3.gene2 T235157_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARGFX
M05369_2.00 		Homo sapiens
NYTAATTARH
DYTAATTARN		 SELEX
Yin et al.(2017)
ARGFX_eDBD_HT-SELEX_1 		0.600 0.263
ARGFX
M05370_2.00 		Homo sapiens
HTAATYTAATTAR
YTAATTARATTAD		 SELEX
Yin et al.(2017)
ARGFX_eDBD_HT-SELEX_2 		0.600 0.263
ARGFX
M05371_2.00 		Homo sapiens
NYTAATTAGH
DCTAATTARN		 SELEX
Yin et al.(2017)
ARGFX_eDBD_Methyl-HT-SELEX_1 		0.600 0.263
ARGFX
M05372_2.00 		Homo sapiens
HTAATYTAATTAR
YTAATTARATTAD		 SELEX
Yin et al.(2017)
ARGFX_eDBD_Methyl-HT-SELEX_2 		0.600 0.263
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig726.frz3.gene2 Homeodomain 356 412

Links

Other Homeodomain family TFs
Other Meloidogyne hapla TFs

Invalid Input OrderBy

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action