CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
nDi.2.2.2.g10679
(
Dirofilaria immitis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
nDi.2.2.2.g10679
T235320_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hoxc11
M00390_2.00
Mus musculus
NTTWAYDDBN
NVHHRTWAAN
PBM
Berger et al.(2008)
Hoxc11_3718
0.387
1.000
Hoxa11
M00474_2.00
Mus musculus
NNHNHNNNN
NNNNDNDNN
PBM
Berger et al.(2008)
Hoxa11_2218
0.387
1.000
Hoxd11
M00493_2.00
Mus musculus
DDDNNNNN
NNNNNHHH
PBM
Berger et al.(2008)
Hoxd11_3873
0.387
1.000
HOXC11
M03131_2.00
Homo sapiens
NWTTWAYGAYH
DRTCRTWAAWN
SELEX
Jolma et al.(2013)
HOXC11_1
0.387
1.000
HOXC11
M03132_2.00
Homo sapiens
NWTTWATKRBH
DVYMATWAAWN
SELEX
Jolma et al.(2013)
HOXC11_2
0.387
1.000
HOXC11
M03133_2.00
Homo sapiens
DRTCGTWAAWN
NWTTWACGAYH
SELEX
Jolma et al.(2013)
HOXC11_3
0.387
1.000
HOXC11
M03134_2.00
Homo sapiens
NTTTTATKRBN
NVYMATAAAAN
SELEX
Jolma et al.(2013)
HOXC11_4
0.387
1.000
HOXD11
M03139_2.00
Homo sapiens
RTCGTAAAWH
DWTTTACGAY
SELEX
Jolma et al.(2013)
HOXD11_1
0.387
1.000
HOXD11
M03140_2.00
Homo sapiens
TTTWATKRBH
DVYMATWAAA
SELEX
Jolma et al.(2013)
HOXD11_2
0.387
1.000
Hoxa11
M03274_2.00
Mus musculus
NNDTTWAYGABN
NVTCRTWAAHNN
SELEX
Jolma et al.(2013)
Hoxa11_1
0.387
1.000
Hoxa11
M03275_2.00
Mus musculus
NDTTWATKRNN
NNYMATWAAHN
SELEX
Jolma et al.(2013)
Hoxa11_2
0.387
1.000
HOXD11
M05120_2.00
Homo sapiens
NRTCGTWAANNDTWAH
DTWAHNNTTWACGAYN
SELEX
Yin et al.(2017)
HOXD11_eDBD_HT-SELEX
0.387
1.000
HOXA11
M04897_2.00
Homo sapiens
VGTCGTAAAWH
DWTTTACGACB
SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_1
0.387
1.000
HOXA11
M04898_2.00
Homo sapiens
DDTTWATKRSN
NSYMATWAAHH
SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_2
0.387
1.000
HOXC11
M05075_2.00
Homo sapiens
NDTTWACGAYN
NRTCGTWAAHN
SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_1
0.387
1.000
HOXC11
M05076_2.00
Homo sapiens
NWTTWATKRCH
DGYMATWAAWN
SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_2
0.387
1.000
HOXC11
M05079_2.00
Homo sapiens
NRTCGTWAAHN
NDTTWACGAYN
SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_1
0.387
1.000
HOXC11
M05080_2.00
Homo sapiens
NDTTWATKRSN
NSYMATWAAHN
SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_2
0.387
1.000
HOXD11
M05121_2.00
Homo sapiens
NRTCGTWAAHNDTWAH
DTWAHNDTTWACGAYN
SELEX
Yin et al.(2017)
HOXD11_eDBD_Methyl-HT-SELEX
0.387
1.000
HOXA11
M04899_2.00
Homo sapiens
NRTCGTAAAWH
DWTTTACGAYN
SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_1
0.387
1.000
HOXA11
M04900_2.00
Homo sapiens
DYTTTATKRCH
DGYMATAAARH
SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_2
0.387
1.000
HOXC11
M05077_2.00
Homo sapiens
NRTCGTAAAHN
NDTTTACGAYN
SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_1
0.387
1.000
HOXC11
M05078_2.00
Homo sapiens
NDTTTATKRSN
NSYMATAAAHN
SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_2
0.387
1.000
HOXC11
M05081_2.00
Homo sapiens
NRTCGTWAANN
NNTTWACGAYN
SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_1
0.387
1.000
HOXC11
M05082_2.00
Homo sapiens
NNTTWAYKRSN
NSYMRTWAANN
SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_2
0.387
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nDi.2.2.2.t10679
Homeodomain
1
14
VKIWFQNRRMKEKK
Links
Other
Homeodomain
family TFs
Other
Dirofilaria immitis
TFs
940 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy